Solanum dulcamara (climbing nightshade): 129894233
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Entry
129894233 CDS
T09577
Name
(RefSeq) exportin-T isoform X1
KO
K14288
exportin-T
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129894233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129894233
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129894233
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Gene cluster
GFIT
Motif
Pfam:
Exportin-T
Xpo1
Motif
Other DBs
NCBI-GeneID:
129894233
NCBI-ProteinID:
XP_055825792
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Position
7:814334..825449
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AA seq
990 aa
AA seq
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MDDLEKAILISFDESGAIDSALKAQAVGYCQQFKETPSICSICIERLCFSKLVQVQFWCL
QCLHEVLRVRYSSMGPEEKSFIRKSVFSLACYESTDDKNLVRVLDGPAFIKNKLAQVMVT
LICFEYPMIWPSVFVDFLSNLSKGVVVIDMFCRVLNALDEEVISLDYPRSQEEVAIAGQI
KDAMRQQCISQVVRAWYDILLMYRNSDPDLCCSVLDSMRRYVSWIDIGLIANDAFVGLLF
ELMLVSGFPDQLRGAAAGCIHAVAAKRMDPKAKLALLQSLQIRKVFGLVAEDNDSELVSS
VASLLTGYSTEVLECSKRLNSEDGKAVSTELLNEVLPSVFYVMQNCEIDETFSIVQFLSG
YVGTLKSLAPLTETQSLHVGQILDVIRSQIRFDPAYRNNLDVLDKTGKEEEDRMADFRKD
LFVLLRSVGRVAPDATQIFIRNSLASAVASNGDVDVEEIEDALSLLYAFGESLSDETMKT
GNGLLGELIPMLLSTKFPCHNNRLVALIYLETVTRYMKFFQENTQYIPLVLSAFLDERGI
HHPNSNVSRRASYLFMRIVKLLKAKLVPYIETILQSLQDTVAQFTTIYAASKELSGCEDG
SHIFEAIGLLIGMEDVPLEKQSEYLTALLTPLCQQVEALLLNAKAQNPEESPAKITNIQQ
IIMAINALSKGFSERLVTASRPAIGLMFKQTLDVLLRILIIYPKIEPLRCKVTSFIHRMV
DILGSSVFPYLPKALEQLLAESEPKELAGFLLLLNQLICKFNTGVQDILEEVYPAIASRV
FNILPRDAFPTGPGSNTEEIRELQELQRTFYTFLHVIATHDLSSVFLSSKSRAYLDPMMQ
LILHASCNHKDILVRKACVQIFIRLIKDWCASPYGEEKVPGFRSFVMEAFATNCCMYSVL
DKSFEFRDANTLVLFGEIVLAQKVMFEKFGNDFLVHFVSKSFQSAHCPQDLAEQYCQKLQ
QGSDVKALKSFYQSLIENLRCQQNGSLVFR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcttgaaaaggcaatacttataagttttgatgaatctggggcaattgattct
gctcttaaagcacaagcagttggctattgccaacaatttaaagaaaccccatcaatttgt
agtatatgtattgagcgtttatgcttctctaaactggttcaagttcagttctggtgctta
cagtgtctgcacgaggttcttcgggtccggtattcatcaatgggtccagaggagaaatcc
tttatccggaaatctgtcttttcattggcttgttatgagagcactgatgataagaatttg
gtaagagttttggatggtccagctttcataaagaataagcttgctcaggttatggtaact
ttaatttgtttcgagtatccaatgatatggccctcagtatttgttgattttttatcaaat
cttagtaaaggtgttgtggttattgatatgttttgtcgagttctcaatgcattggatgag
gaagtaattagcttggactatccgagaagccaagaggaggtggctatcgctgggcaaatt
aaggacgcgatgaggcagcagtgtatttctcaggttgtcagggcttggtatgatatcctg
ttaatgtacaggaattccgatccggatttgtgttgtagtgtgttagattctatgaggagg
tatgtttcgtggattgacataggtttgatagcaaatgatgcgtttgttggattgttattt
gagttgatgctggtgagtggttttcctgatcaactcagaggtgctgctgctggttgcatc
cacgctgttgctgctaagcgcatggatccgaaagcaaaactcgctcttttgcagagcctt
cagattagaaaggtttttggtttggtagcagaggataatgactctgagttggtatcaagt
gttgcttctttgcttactggatattcaactgaggttttggagtgttcgaagcgtttgaac
tctgaggatgggaaagctgtctcaactgaactattgaatgaggttttgccctctgttttc
tatgtaatgcaaaattgtgaaattgatgaaaccttcagtattgtgcagttcctctctggt
tatgttggcacattgaagagtctggctccattgaccgagacacagtcacttcatgtaggt
cagatactggatgttattcggtctcagatccgatttgaccctgcatatcgcaataacctc
gatgtgttggacaaaacaggaaaggaagaggaagatcggatggctgatttcaggaaagac
ttgtttgttctacttcggagtgtgggccgtgtagcacctgatgcaactcagattttcatc
aggaactccttagctagtgctgttgcatctaatggggatgtggatgttgaggagatagaa
gatgcactctctcttctatatgcctttggggaatcacttagtgatgaaaccatgaaaaca
ggaaatggtctcttgggagaactaataccaatgcttttgtcgacaaagtttccttgccac
aacaacaggcttgttgcacttatctacttggaaacagtaacgaggtatatgaaatttttt
caggagaatacacaatacatacccttagttttgagtgcctttcttgatgaaagaggcata
catcatccaaatagcaatgtgagtcgaagggcaagttatcttttcatgaggattgtgaag
ctgctcaaagcaaaacttgtaccctacatagagactattctgcagagtttgcaagataca
gttgctcaattcacaacaatttatgctgcctccaaggagctttcaggttgtgaagatggc
agtcacatttttgaggcgattggcttattaattggaatggaagatgtaccacttgaaaag
caatctgagtacctaaccgccttgcttactcctctttgtcagcaggttgaggctttgctc
ttaaatgccaaagcccagaatcctgaagagtctccagcaaagatcacaaatatccagcag
ataattatggccattaatgctctgagcaagggttttagcgagcgtcttgtaactgccagt
cgtcctgctattggtctcatgtttaaacagacgttggatgtcctcctacgtattcttatc
atatatccaaagatagaacctctgcggtgcaaggtcacatcattcattcaccgcatggtg
gacatactaggatcatctgtatttccatatctaccaaaggcactggagcaattgctagct
gaaagtgagccgaaagaactggcaggctttttgctattgcttaatcaactgatctgcaaa
tttaacactggagttcaagacattctggaggaagtttaccctgctattgctagcagagta
tttaatatcctcccgagagatgcttttcctacaggtcctggaagcaatacagaggaaatc
cgtgagctacaggaacttcagaggacgttttacacttttcttcacgtgattgctacacat
gatctgtcatcagtttttctttcctccaaaagtagggcttacttggatccgatgatgcag
ctgatattacatgcatcctgtaatcacaaggatatccttgttcgtaaggcatgtgtacag
atatttataagactaatcaaagactggtgcgcgagtccttatggtgaagaaaaggtgcct
ggtttccgaagttttgtgatggaggcctttgcaacaaactgttgtatgtacagtgtcctt
gacaaatcctttgagttccgtgatgcaaatacgcttgttctttttggcgagattgtattg
gctcagaaggtcatgtttgagaaatttggcaatgattttcttgttcattttgtatcaaaa
agcttccaaagtgctcattgccctcaagatttggctgagcagtattgtcagaaattgcag
cagggcagcgatgttaaagcgctgaaatcattctaccagtcacttattgaaaatttgaga
tgtcaacagaatggaagcttggtgtttagatag
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