Solanum dulcamara (climbing nightshade): 129894244
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Entry
129894244 CDS
T09577
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129894244
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129894244
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GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HH_signal
HVO_0758
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
129894244
NCBI-ProteinID:
XP_055825809
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Position
7:complement(30065623..30083147)
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AA seq
381 aa
AA seq
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MEKELIELFDAVKRAADAAAVDGGADSSAEESRCLDVLKRLKKFPVNYQVLVSTQVGKRL
RILTKHPREKIQALACDVVKNWKTIIVRETMKNKNGNEVNGESVKAECAGDDGDEGYKFQ
RVNSVKVEKVLRVENVTVERSSKSLTPKSERSVKSESSFTDVKSENVTVMKTENTTSKSV
KIEKKPKDEKLACNVSSAAPPKLSALVYCKDSVRDKVRELLAEALCKVSVEVDDDLRDAV
NGCDPYRVAVQVETAMFEKWGKSSGSQKFKYRSIMFNIKDPNNPDFRRKVLIGQYSPHSI
VDLSPEDMASDERQKENKRIKEKALFNSQLGGPPKASTDKFKCGRCGKNQTTYYQMQTRS
ADEPMTTYVTCVNCDNRWKFC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagctaattgagcttttcgatgcggtaaagcgagcagctgatgcagccgct
gtagacggtggtgcagattcttcagcggaggagagtaggtgccttgacgttttgaagcgg
ctcaagaaatttcctgtcaattatcaagtcctcgtttccacacaggtgggcaaacggctc
cgaatattgacaaaacatccaagggagaagatccaggcgttggcttgtgatgtagtgaag
aactggaagactataattgtgagagagacaatgaaaaataagaatggcaatgaagtaaat
ggggaatctgtaaaagctgaatgtgctggtgatgatggtgatgaaggctataaattccag
cgtgtgaactcggtgaaggttgaaaaggtgttaagggttgagaatgtgacggttgagagg
tcaagtaagtctctaactccaaagtctgagagatcagttaagtcagaaagttccttcact
gacgtaaagtctgagaatgttactgttatgaagactgagaatacaacttccaaaagtgta
aagattgagaagaaacccaaggatgagaaattggcctgtaatgtgtctagtgctgcccca
ccaaagttgtctgctcttgtttattgcaaggattctgtgagagacaaagttcgggagctc
cttgctgaggctctttgcaaagtctcggttgaagttgatgacgatttgagggatgctgtg
aatggctgtgatccttatagagttgcagttcaggttgagactgcaatgtttgagaagtgg
ggtaaatctagtggttcccagaagtttaagtataggtcaattatgtttaacattaaggat
ccaaacaacccagattttaggaggaaagtccttataggacagtattcacctcatagtatt
gttgatttgagcccagaagatatggcaagtgatgaaaggcaaaaggaaaataagaggatt
aaagaaaaagcattatttaatagccagcttggaggtcctccaaaggccagcacagataag
tttaagtgtggtaggtgcgggaaaaatcagaccacttactaccagatgcaaactcggagt
gctgatgaaccgatgacaacatatgtcacgtgtgtaaactgcgataatcgctggaagttc
tgttaa
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