Solanum dulcamara (climbing nightshade): 129894253
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Entry
129894253 CDS
T09577
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129894253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129894253
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129894253
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
129894253
NCBI-ProteinID:
XP_055825833
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Position
7:complement(16527080..16533466)
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AA seq
708 aa
AA seq
DB search
MNHRQEKFVRFQDWNSEKSSEGNFPYKDGAHRGKFGVFSNELHKALESGSGRIKSIIHAL
NSCLSCLLAKSLGSEKKMLDPQGPFLQKWNKIFVLSCVIAVSLDPLFFYIPVIDNNNKCL
HLDRKMEVTASVLRSITDIFYLLHIVLQFRTGFIAPSSRVFGRGVLVEDAWEIAKRYLSS
YFLIDILAVLPLPQVAILIVIPKLRGAKSLNTKNLLKFVIFFQYIPRLLRVYPLYKEVTR
TSGILTETAWAGAAFNLLLYMLASHVLGAFWYLFSIERESTCWQRACGNSSACHHSSLYC
DDDHTKFKTLLNSSCPIETPNATLFDFGIFHEALKSGVVESMDFPQKFFYCFWWGLQNLS
SLGQNLETSTYVWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTLRLEEMRVKRRDAEQW
MSHRLLPEHLRERIRRYEQYKWQETRGVDEENLILNLPKDLRRDIKRHLCLSLLMRVPMF
EKMDDQLLDALCDRLRPVLYTENSFIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSD
YLKAGDFCGEELLTWALDPHPSNNLPISTRTVQALSEVEAFALVADDLKFVASQFRRLHS
KQLRHTFRFYSQQWRTWAACFIQAAWRRHCRKKLEESLCEEENRLQDALARGGGSSPSLG
ATIYASRFAANALRALRRNTAKKARMADKISPILLQKPAEPDFTAEDK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatcggcaagagaaatttgtgaggtttcaggattggaactcagagaaaagctca
gaggggaattttccatataaagatggagcacacaggggcaagtttggagtgttctccaat
gaattacacaaagccctggaaagtggttctggaaggatcaaaagcataatacatgcctta
aattcttgtttaagttgtcttctggccaaaagtttgggatcagaaaaaaagatgcttgat
cctcaaggaccttttcttcagaagtggaacaaaatatttgtattatcttgtgtaattgcc
gtctccttggatcctttgttcttttacattccagtgattgataataacaacaaatgcctg
catttggatagaaaaatggaggttacagctagtgttttgcgttccatcactgatatcttt
taccttctccatattgtgcttcaatttcgtactggtttcatcgccccttcatcacgtgta
tttggaagaggcgttttggttgaagatgcttgggaaatagctaagagatacttgtcctcg
tacttcttaatagatattcttgcagttcttcctctaccacaggttgcaattttaattgtc
attcctaaattgcggggtgctaaatcattgaatacgaagaatttgctgaaatttgtcatc
ttcttccaatatattccaaggctccttcgagtatatcctttatataaggaagtcactaga
acttctggcatactcactgaaactgcatgggctggagctgcatttaatctccttctttat
atgcttgccagtcatgtacttggagccttttggtacctgttttctattgaacgtgaatct
acttgttggcaacgagcatgtggaaattcatctgcttgtcatcattcttcattgtactgt
gatgatgatcatacaaaattcaaaacattgctaaatagttcatgtcctatagagacacca
aatgcaacactttttgattttggaatattccatgaagccctaaagtctggtgttgtggaa
tcaatggattttccacagaagttcttttattgtttctggtggggtttgcagaacttgagt
tcccttggtcaaaacctcgaaacaagtacctatgtctgggaaatttgctttgcagttttc
atttccatcgccggcttggtgctattttcatttcttattggaaatatgcagacatatctg
cagtccacaacactcagactagaagagatgagggtgaaaagacgagatgcagagcagtgg
atgtctcaccgcttactccctgagcacctccgggagaggatcaggcgctatgagcaatac
aagtggcaggaaactaggggtgttgatgaagagaatctgatcctcaacctgcctaaagat
ctcagaagagatataaagcgtcatctttgtttgtctttgctaatgagggttccaatgttt
gaaaaaatggatgaccaactcctggatgcactatgtgaccgtctcaggcctgtcctttac
actgagaacagcttcattgtgcgtgaaggtgatccggttgatgagatgctttttataatg
cggggaaaactattgactgtaaccactaatggagggaggacaggcttttttaactctgat
tatctaaaagctggtgatttttgtggagaagagcttcttacttgggctctggatcctcat
ccatcaaataacctcccaatctcaacccgaactgtccaagcgctctcagaagttgaagca
tttgctctagtggccgatgatttaaagtttgtagcctctcagttccggagacttcatagc
aagcaactccgccatacttttaggttttactcgcagcaatggagaacctgggcagcttgc
ttcatacaagcagcatggcgccgtcattgtaggaagaagctagaagaatctctttgcgaa
gaagaaaacagattacaagatgcactagcgaggggaggtggtagctcgccaagtttgggt
gctactatctatgcatcgcgatttgctgctaatgcgcttcgtgctttgcggcgcaatact
gcaaaaaaagcaaggatggcagacaagatatcacccattttgcttcagaaaccagctgaa
ccagattttactgctgaagataagtaa
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