Solanum dulcamara (climbing nightshade): 129894270
Help
Entry
129894270 CDS
T09577
Name
(RefSeq) amino acid transporter AVT1C-like isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129894270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdul02000
]
129894270
Transporters [BR:
sdul02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
129894270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
129894270
NCBI-ProteinID:
XP_055825854
LinkDB
All DBs
Position
7:43759569..43771109
Genome browser
AA seq
551 aa
AA seq
DB search
MKNSISEQSFYIESEEEDDEHLEKHENEEEEGNESDFSNEDNNDDERNRPNSLTSAWPQS
YRQSMDLYSNVPSPSLNFLGTPSLSRLGSSFLGSSLIRRHTPEVLPSLHKPLIPPAEEEK
APHRRSSHGLLPPLHPRKSSIKKIPDERPSKDAHGLPISRQSSYGQAVINGMNVLCGVGL
LSTPYAVKEGGWAGLSILFIFGILSFYTGMLLRYCLDSQPGLETYPDIGQAAFGTTGRIL
ISIILYVELYASCVEYIILEGDNLSAIFPNAHLSLGGFELDARHLFVVIATLAILPTVWL
RDLSVLSYISVGGVIASFLVVLCLYWAGLVDHVGFESKGTVLNLSTLPVAIGLYGFCYSG
HAVFPNIYTSLADRSQFPAVLLTSFGMVTLLYGGTAVLGYLMFGDSAESQFTLNLPKGLM
ASKVAVWTTVVNPFTKYALTLSPVAMSLEELLPSKHGKSHVYPILIRTALAISTLVVGLA
VPFFGLVMALIGSLLTMLVTLILPCVCFLRILKGKTSRFQVTICALIITIGTASAVIGSY
SALSNIIQSMT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattccatatctgaacagagtttctacatagaaagtgaggaagaggatgatgaa
catttggaaaaacatgaaaatgaagaagaagaaggaaatgaatctgatttttcaaatgaa
gacaataatgatgatgaacgtaatcgacccaattccttaacctctgcttggccacagagt
tacaggcaatctatggatctatacagtaatgtaccatctccaagtcttaacttcttggga
accccttcattatctcggctaggaagttcattcttgggctcatctctcataagaaggcac
actcctgaggtattgccctctcttcacaagcctctcatacctccagcagaagaagaaaaa
gcacctcacaggcgtagttctcatggtttgctgcctcccctacacccgaggaagtcttct
attaagaaaatacctgatgagagaccttccaaggatgcacatggacttccaatttctcgc
caaagctcctatggccaagcagtgataaatggcatgaatgttctctgcggagtaggcctt
ctttctactccttatgctgtgaaggaaggtggatgggccggactttcaatattattcatt
tttggcatcctctctttctatactggcatgctcctgcggtactgcttggatagccaacca
gggcttgagacatacccagacattggtcaggctgcttttggtacaacgggacgaattctt
atatcaataatcttatatgtggaattatatgcctcctgtgttgaatacataatcttggag
ggtgataacttgtctgctatatttccaaatgcacatttaagtttgggtggatttgagtta
gatgctcgccatctttttgttgtgatagccaccctggctattcttcctactgtttggctg
cgtgacctcagtgtcctaagttatatctcagttggaggagttattgcttcttttttggtg
gtcctttgcttgtactgggctggcttggtggatcatgtaggctttgaaagcaaagggacc
gtacttaacctatcaactcttcctgttgctattgggctctatggattttgttactctggg
catgcggtctttcccaatatatatacatcccttgcagatcgtagtcaatttcctgcagtc
cttttgaccagttttggaatggtgactctgttgtatggtggaacagctgtgttgggatac
ctgatgtttggggactcagctgaatcccagtttactctaaatttgcccaaaggattaatg
gcttccaaggttgcggtatggacaactgttgttaatccttttacaaaatatgctttaacc
ctgtctcctgtagcaatgagcttggaggaattgttgccatcaaaacacggcaaatctcac
gtgtacccaatcctcattagaactgcattggcaatctcgacattagtagttggtcttgcg
gttcccttttttggtttggtaatggcactgattggatcgttacttacaatgctagtgact
ctgatattaccttgtgtttgcttcctgagaatcttaaagggaaaaacaagtcgctttcag
gttacaatatgtgcccttattatcacaataggtactgcatctgcagtgatcggttcctat
tcagctctctccaatatcattcagagcatgacctaa
DBGET
integrated database retrieval system
