Solanum dulcamara (climbing nightshade): 129894292
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Entry
129894292 CDS
T09577
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129894292
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129894292
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129894292
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Motif
Pfam:
Ion_trans
DUF6525
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
129894292
NCBI-ProteinID:
XP_055825884
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Position
7:12544154..12561014
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AA seq
768 aa
AA seq
DB search
MGTSEKDEVPMLSPSYPHSDENDAFQNRRFTYRTRSASVSMPMSSMDSFENDSSYVGYTG
PLTSERRTSLVQMSGPLYIGREPGNSFRPTTVHKPTLPTTETYPSISSAERNGWRNNDYT
GKNEHLLKSGQLGMCSDPYCTTCPTYHHLKARQNNSKSSDIFDHRFHNVLYGDAKGWAKR
ACSFLHPYIHGIMNPHAKEVQQWNKFFVISCLFAVFIDPLFFFLLGVQKGNKCIVLNWPL
TTTIVILRSITDIIYLMHILLQFRLAFVAPESRVVGAGDLVDHPKKIAINYLSGYFAIDF
FIVLPLPQIIILLILPKSIASSGANYAKNLLRVAILFQYIPRLCRFLPLIAGQSPSGFVF
ESAWANFFINLLTFVLSSHVVGSCWYLFGLQRVNQCLRDACRGSKIARCVEFIDCGHGND
YRKFRWDPTWDQWKNNSDAVACFTNGGFDYGIYEQAVNLTTEGSVVTRYVYSLFWGFQQI
STLAGNQVPSYFVWEVMFTMAIIGMGLLLFALLIGNMQNFLQSLDRRRLEMSLRRRDVEQ
WMSHRRLPVELRRRVQEAESYNWAATRGVNEEMLLENLPEDIQRDIRRHLFKFIKKVRIF
ALLDEPIIDAICERLKQKTYIAGSKVLYRGGLVNKMVFIIRGKMESIGEDGNVASLSEGN
ACGEELLTWCLEHSSINRDGKKVRIPGHRLLSNRLVRCLTNVEAFILRASDLEEVTNLFA
RFLRSPLVQGALRYESPYWRGLAARQIQVAWRYRKKRQSRTDSSSPRH
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggcacttcggaaaaagatgaggtgccgatgttatcaccatcatacccacattctgat
gaaaatgacgcctttcaaaatcgacgttttacgtacagaacaaggagtgcatccgtgtca
atgccaatgagctctatggattcatttgaaaatgatagtagttatgtaggctatactggt
cctttgacaagtgagaggcgaacttcattagttcaaatgagtgggccattatatattggt
cgcgagcctggtaatagctttcggcccactaccgtgcataaaccaactctgcctacaaca
gaaacatatccttcaattagcagtgcagaaagaaatggttggcgtaataatgactacact
gggaaaaatgaacatctcttgaagtctggacaactgggcatgtgcagtgatccgtactgc
acaacatgtccaacctatcaccatttgaaagcacggcaaaataattcgaagtcttcagat
atatttgatcacaggttccataatgtgctgtatggagatgcaaaaggatgggcgaagaga
gcttgttctttcttgcatccatatattcatggcatcatgaatcctcatgcgaaggaagtc
cagcagtggaacaaattttttgtcatctcatgcctatttgcagtatttatagatcccctg
ttcttctttttgcttggtgtccaaaaggggaacaaatgcatagtgctaaattggcccctg
acaacaactattgtgattttgaggagcatcactgatatcatctacttaatgcacatcctt
cttcagttccgcttagcttttgttgcccctgaatcgagggtggtgggtgcaggtgacctg
gtggaccaccctaaaaagattgctataaactatctctctggatactttgctattgacttc
tttattgtattaccacttcctcagatcatcatattgctgattttacccaagtctattgca
tcatctggggcaaattacgcgaagaatctattgagggtagctatactattccagtacatt
cctaggttgtgcaggtttttgcctttgatagctggccagtctccaagtggttttgtattt
gagtcagcatgggcaaattttttcataaatcttctcacttttgttttatcaagccatgtg
gtgggttcatgctggtatctttttggtttacagagggtgaatcaatgtcttcgagatgct
tgtcgtggatcaaagatagcgaggtgtgtggaattcatagactgtggtcatggcaacgat
tacagaaagtttaggtgggatccaacatgggatcagtggaagaacaattctgatgcagtt
gcttgttttactaacggtggttttgactatggaatctatgaacaagctgtcaacctaacc
actgaagggagtgttgtcacgagatatgtgtactcattgttttggggcttccagcaaatt
agtacactagctggcaatcaagtaccgagttattttgtgtgggaagttatgttcacaatg
gctatcatcggaatgggactcctgctttttgccctcctgattggaaacatgcaaaatttt
ctgcagtctctagatcgcaggaggttagaaatgtctctgagacgtcgtgatgttgaacaa
tggatgagccataggcgcttgccagtagaactgagaaggcgagttcaagaggcagaaagc
tataattgggcagctacccgaggagtcaatgaagaaatgctactagagaatcttcccgaa
gacattcaaagagatataaggagacatctttttaaattcatcaaaaaggttcgaatattt
gcacttctagatgaacctattatagatgccatctgtgagagattgaaacagaaaacatac
atagcaggaagcaaagttttataccgtggtggtcttgttaacaagatggttttcataatt
cgtggtaagatggaaagcattggagaagatggaaatgtggcctccttgtctgaagggaat
gcctgtggggaagaactcctcacatggtgccttgagcattcttctataaacagagatggg
aaaaaggtcagaattccaggccacagattgctgagcaacagactagttaggtgcctaaca
aatgttgaagcatttatattgcgagcttcagatcttgaagaagtcactaatctcttcgca
agattcttgaggagtccacttgtccagggtgccctaaggtatgaatctccatattggcga
gggctggcagcaaggcagatacaagttgcctggagatacaggaagaaacgtcaaagtcga
acggactcttccagcccccgacactaa
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