Solanum dulcamara (climbing nightshade): 129894410
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Entry
129894410 CDS
T09577
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129894410
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
129894410
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
DUF4143
Motif
Other DBs
NCBI-GeneID:
129894410
NCBI-ProteinID:
XP_055826070
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Position
7:78108290..78111190
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AA seq
526 aa
AA seq
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MENSRSCKNCQKRTIGSDDTTGNPVCLSCGFIQDFDNYDPQIGGISGPSGTQVRTGTAGA
GTIYNYHETKTYNAQKEIEEITFQLGFSSSKSSEVKDMVVKVTNGEYGQGRWFTVFIGAC
AYVVMRNDGKPLAIVTVANLVGCDIYELGRMVYRVVDFLDLKLPEFDIVDSFEHYIRNAP
SFSEVSEDMIGRMLKQGVFLVQCLVKWYVTTGRRPLPVVAAVLVFVAKLNQVDVVIEDVA
NELQVAVVTCRLRYKELLERLVKVARGLPWGEDVTVKNIMKHATFVVQYMELKSMSKNRD
KKKNFEDVGFDLDYLIDDCLSNGNDYALDDADTIKDSQYFQMDRSTRLVIESSNRFQISQ
ECLAMIYSKMKNEMCVQESTDNRDNNIRKRKRRYDMLSYTDWWKGESEMSKKLLVKQIVD
RDVGLSAMPPSFDSGCLAYERRKEKIKAAKFRIHKTMYPSDAGSIDTVDLGSLEHVNAGK
KRRRKMKVNIDWEDFIIEALLLHQVEEVEIEKGYYKTLLDLHVFNY
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattctcgttcctgcaagaattgtcaaaagcgtacaatcggttcagatgataca
acaggtaatcccgtttgcttatcatgtggatttatacaagatttcgataattacgatccc
caaatcggtggaatcagtggtccatctggaacacaagtccgtaccggtaccgccggtgcc
ggaactatttataattaccatgaaacaaaaacttacaatgcccagaaagaaattgaagaa
ataacgttccaattaggattttcgagctcgaaatctagtgaagttaaggatatggtagtg
aaagttactaatggcgaatacggtcagggtagatggtttactgtattcattggtgcttgt
gcttatgttgttatgaggaatgatggtaagccgttagctattgttacagtagctaattta
gtgggttgtgatatttatgaactaggtcggatggtttatcgggttgtcgattttcttgat
ttgaagttgcctgaatttgatattgttgattctttcgagcattatattaggaatgcaccg
agttttagtgaggtttctgaggatatgattgggaggatgttgaaacagggtgtttttttg
gtgcagtgtttggtgaagtggtatgtgacgacggggaggaggccgttgcctgttgtggca
gcagttttggtttttgttgcaaagttgaatcaagttgatgtggtgattgaggatgtggcg
aatgagttgcaagtggcggttgttacttgtaggttgagatataaggagttgttagagagg
cttgtgaaggttgctcgaggtttgccttggggcgaggatgttactgttaagaatattatg
aaacacgcgacttttgttgttcaatacatggagttgaagtcgatgtcgaagaacagagat
aaaaagaagaattttgaagatgttggatttgatttggattatttgatcgatgattgtttg
agcaacggaaatgattatgctttagatgatgccgacaccataaaagactcacagtacttt
cagatggatcgctctacaaggttggtgattgaaagttcaaatagattccaaatttcccaa
gagtgtttggcaatgatatattcgaagatgaagaatgaaatgtgtgtacaggagtctaca
gataacagagataataacattaggaaaaggaagagaaggtatgacatgctttcatacaca
gattggtggaagggagaatcggaaatgagcaaaaagcttttagtgaagcaaatagttgat
agagatgtgggattgagtgctatgcctccttctttcgatagtggttgcttggcatatgaa
aggagaaaagagaagataaaggctgcaaagtttcgaatccataagacaatgtatccttca
gatgctggttcaattgatacggtcgatctaggctccctcgaacacgtaaatgctggaaag
aaaaggagaaggaaaatgaaagttaatattgattgggaggatttcattattgaagccctt
ctgcttcatcaggtggaagaagtggagatagaaaaggggtattacaaaaccctgttggac
ttgcatgttttcaactattga
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