Solanum dulcamara (climbing nightshade): 129895299
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Entry
129895299 CDS
T09577
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
sdul04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129895299
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129895299
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129895299
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129895299
03036 Chromosome and associated proteins [BR:
sdul03036
]
129895299
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129895299
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129895299
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129895299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
Cnd1
HEAT_EF3_N
Htt_N-HEAT_1
Adaptin_N
RTP1_C1
SCD
Motif
Other DBs
NCBI-GeneID:
129895299
NCBI-ProteinID:
XP_055826968
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All DBs
Position
7:complement(3319144..3327161)
Genome browser
AA seq
595 aa
AA seq
DB search
MSMSAKSLYSIAVLVDEMKSQDVRVRLNFMGGLSTIAKALGAERTRSELIPFLSENIDHD
DEEVLLAMIKQLGMFLPYVGGVEHASVLLPLLENLCTTEETCIRDKAVELLCNIGCQMSE
PDFIESFIPMLKRLTAGVWISDRISSCGLFHIAYPRVPEHLRNELRTMYRELCRDDMPNV
RKAAAANIGKFIATIEQPHVKNDIMLMFKDLAKDDQDYVRLFAVKSCIDLWKQLEPPICV
PELVPIIVKFTQDKYWRVRCMVANQLLELCHTVGPDATRTDMVRAYVRLARDKEVEVRTT
VACKVTTFCQILTPEITVQHILPCVKALSSDSSRFVRTALSLDIVGLAPILEKDATIEHL
LPTLQSLLKDSFSEVRWNIVSKLDQMNQVIGIDVLSQTLLSVIVELTAVRHSWRIRHVMI
QFIPIMASELGVGFYNDVLVSLCLQWLKDKICVVREGAVQNLKRLAEIFGREWTSEHIIP
QVLNMINDKYSLYRNNILDALLNLAPVMGSEITCSQILPVILAASKDSVPNVRFHVAKVL
KSLASVVDQSAVEKSIRPCLNELKEDKDPEVEYFAKESLQAIDQVIGQNKISPCS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgagtgccaaatccttatatagtattgcggttttagttgatgaaatgaaaagc
caagacgtccgggttagattgaatttcatgggaggcctgtctactattgccaaggcactt
ggtgcagagagaactcggagcgagctgattccatttctgtctgagaatattgatcatgat
gatgaagaagttcttcttgctatgattaaacagttgggaatgtttcttccgtatgtagga
ggagttgaacatgctagtgtgttacttccactcttggaaaatctctgtactactgaagag
acttgcattagagacaaggcagttgagttattgtgcaacatagggtgtcagatgagtgaa
ccagactttattgaatcgtttattccaatgttaaagagacttactgctggggtgtggatt
agtgatcgaatttcatcatgcggattatttcacattgcctatccacgtgtcccagagcat
ttaagaaatgaacttagaactatgtatagagaactttgccgtgatgacatgcctaatgtg
aggaaagcagctgcagcgaatattgggaagtttattgcgactattgagcaaccccatgtg
aagaatgacatcatgttaatgttcaaggatctggccaaggatgatcaagattatgttcgt
ttgtttgctgtcaagagctgcatagatttatggaagcaattggagccaccaatttgtgta
ccagagcttgtccctataatagttaaatttacacaggataaatattggcgagttcgttgc
atggttgcaaatcaacttcttgaactatgtcacacagttggaccagatgctaccaggacg
gacatggtccgtgcatatgttcgtctagctcgtgataaggaggttgaagttcgcacaact
gtagcttgtaaggtcaccacattttgccagatattgaccccggagattacagtccagcat
atccttccttgtgtcaaggcactatcatcagattcatcccggtttgttcgtactgctctg
tctttagatattgtaggactggctcctattttagaaaaggatgcaaccattgagcacctt
ctcccaacactccagtctcttctgaaggacagtttctcggaagttcgttggaacattgtc
agtaagcttgaccaaatgaatcaggtgattggaattgatgtgctctcccaaacactcttg
tcggttattgttgaacttacagcagttagacacagctggagaattcgtcatgtaatgata
cagttcatccctataatggcgagtgagctgggtgttggattttacaatgacgtacttgtt
tctctttgccttcaatggttaaaagataagatttgcgtggttcgagagggggcagtacag
aatcttaagagactagcagagatatttggtcgagaatggacatcagagcatatcattcca
caggtcttgaacatgattaatgacaaatattctctttatcggaacaacattctagatgca
cttctaaatcttgcccctgtaatgggctcagagattacttgttcccaaattttgccagtt
atacttgctgcatcaaaagacagcgtaccgaatgtaaggttccatgtggcaaaggtgttg
aagtctcttgcttctgtagttgatcaatctgctgtggagaaatcaattcggccatgttta
aatgaactcaaagaggacaaggatcctgaagttgagtattttgccaaggaatctcttcag
gcaatcgatcaagtgataggtcaaaacaagatttctccttgttcatag
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