Solanum dulcamara (climbing nightshade): 129895314
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Entry
129895314 CDS
T09577
Name
(RefSeq) probable pectate lyase P56
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00040
Pentose and glucuronate interconversions
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129895314
Enzymes [BR:
sdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
129895314
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
129895314
NCBI-ProteinID:
XP_055826986
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Position
7:53116340..53117943
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AA seq
397 aa
AA seq
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MEYSYRTKLNVFIVLSLFVFAAVGTATNAPRRKLSKKYKGPCMAVNSIDKCWRCDPNWAE
DRQKMADCALGFGINAMGGKYGPYYIVTDNSDDDVIDPKPGTLRFGVIQKGPLWITFAKS
MRIELTRELIVSSNKTIDGRGKYVHIANGAGIKIQSASNIIISNLRIHNIVPTPGGLLRE
SDDHLGLRGGDEGDAISIFNSHDIWIDHISMSRAADGLIDAVAGSTNITISNCHFTDHEK
VMLFGANDHSEEDRSMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSS
GATIISQGNRFIAEDKLLVKEVTYREKSTSSVEEWMKWTWISDGDDLENGATFTPSGDQD
LLAKIDHLNLIEPEPSSKVGLLTKFSGALSCKVRRPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagtactcgtatagaacaaaactcaatgtattcattgtgctcagtctgtttgtattt
gctgcagtagggaccgcaacaaacgctccgaggaggaaactctcaaagaaatacaaaggc
ccgtgtatggccgtgaattctatcgacaagtgctggagatgcgaccctaactgggccgaa
gatcgccagaaaatggccgattgtgcattgggttttggtatcaatgcgatgggaggaaag
tatggtccgtactacattgtcacggacaattctgacgatgacgttattgatcctaagcct
ggaactctccgattcggggtgatccaaaaggggcccttgtggatcacatttgccaaaagc
atgagaattgaattaaccagggaacttattgttagtagcaataaaacaattgatggacgt
ggaaaatacgttcacatagcaaatggagctggcattaagatacaatctgcatctaatatt
attatctctaaccttcgaattcataatattgtacctaccccaggtggcctgcttagggaa
tccgacgaccaccttggcctaaggggcggagatgaaggtgatgccatcagtattttcaat
tctcatgatatatggattgaccacatctctatgtcccgtgccgctgatggtcttatcgat
gctgttgctggttccactaatattaccatatctaactgtcacttcactgaccatgaaaaa
gtaatgttgttcggtgctaacgatcattccgaagaagacaggtcaatgaaaataacatta
gcgtacaaccactttggaaagaggttggatcaaaggatgcctcgatgcaggtttggattt
ttccatctggtgaacaatgactacactcattgggaaaggtacgctattggaggaagcagt
ggagcgaccatcatcagccaagggaatagatttattgcggaggataaattgttggtgaaa
gaagtgacatatagagagaaaagtacatcaagtgtggaagaatggatgaaatggacatgg
atatcagatggtgatgatttggaaaatggtgctacatttacaccatctggggatcaagat
ttactcgccaaaattgaccatctcaatttgatagagccagaaccatcttctaaagttgga
ttactaactaagttttctggtgcattgtcttgcaaagttcgacgcccatgctaa
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