Solanum dulcamara (climbing nightshade): 129895443
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Entry
129895443 CDS
T09577
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 8
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129895443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129895443
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129895443
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
129895443
NCBI-ProteinID:
XP_055827137
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Position
7:5861742..5867278
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AA seq
695 aa
AA seq
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MFGNYKSQLIGGQKEKFVRLEDANSDLSFKSDMAGRKKYGFNIEGMTAGGHVTNPSKSIK
LGVRRGSQGLVTFGRTLKSGVTRAVFPEDPRVSDKRIFDPQDKSLLFWNRLLVISCIFAV
SIDPLFFYLPVFKTEGQCLHIDESLAIIVILMRTVIDLFYLIRMGLQFRTAFIAPSSRVF
GRGELVIDPKQIAARYIRRYFIVDFLSVLPLPQIMTWRYLAGSRGSDVLYTKDALVAIII
IQYIFRFWRFIPLSSDLKKTAGVFAETAWAGAAYYLLWFVLASHIFGAFWYLLAVERKDT
CWNEACTENDQCNEQLSNLYCSREGNFNLTEWQDIGKSVLDEKCAEEENFQYGIYARAVT
SKVLDTEDFITKYCFCLWWGLQNLSTLGQGLETSTYTLENLFSIILAISGLLLFALLIGN
MQTYLQSLTVRLEEMRVKRRDSEQWMHHRVLPPELRERVRRYDQYKWLETRGVDEESLVQ
NLPKDLRRDIKRHLCLNLVRRVPLFENMDERMLDAICERLKPSLCTESTYIVREGDPVGE
MMFIIRGRLESVTTDGGRSGFFNRGILKENDFCGEELLTWALDPKSGSNLPPSTRTVKAL
TEVEAFALEAEEVKYITSQFRRLQSRQVQHTFRFYSQQWRTWAASFIQAAWRRHTRRKMA
ELRLHEEMEENGFNENDDGENELTPMLYKSPERPY
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtaattacaagtcgcagcttattggaggacaaaaagaaaagtttgtaaggttg
gaggacgctaactctgacttatcgtttaagtccgatatggctggaaggaaaaagtatggg
tttaatatagagggaatgactgctggtgggcatgtaaccaatccatccaagtcaataaaa
ctgggagtaagaagaggatctcagggactagtgacatttggcagaacactgaaatctggc
gttacccgagcagtttttccagaagatccaagagtttcagataaaaggatatttgatcct
caagacaagtctctcctgttctggaataggctattggtcatatcatgtatttttgcagta
tctattgatcctctatttttctaccttcctgtttttaagactgaagggcagtgtctccac
atagatgaaagtttagcaatcatagtaattttgatgcggacagtaatcgatctcttttac
cttatccgcatgggtctccaatttcgaacagcttttattgctccatcttcccgtgttttt
gggcgaggcgaacttgtaatagatcccaagcaaatagcagccagatacatccggcgttac
tttatagtggatttcctttccgttcttcctttaccgcagattatgacatggagatatcta
gctggatcaagaggttcggatgtattgtatacaaaggacgcattagtggccatcatcatc
attcaatatatctttagattttggaggtttattccattaagttcggatttgaaaaagact
gcaggggtgtttgcagaaactgcttgggctggtgctgcatattatctgttgtggtttgtg
ctggctagtcatatatttggggccttctggtacctgttagctgtcgaacgcaaagataca
tgttggaatgaagcatgtaccgaaaatgaccagtgcaacgaacaattatctaatctgtat
tgttcacgtgaaggaaactttaatttgacagaatggcaagacattggtaagagtgttctt
gacgaaaaatgtgctgaggaggagaactttcaatatggaatatatgcaagagctgtaaca
tctaaggttcttgacactgaggatttcattaccaaatactgtttttgtttgtggtggggc
ttgcagaatttaagcacacttggtcaggggcttgaaaccagtacctatactctggaaaat
ctcttttcaataatattggccatttccggactcctactatttgctcttctcattggaaac
atgcagacctatcttcagtctctgacagtacggcttgaggagatgagggtcaaaaggcgt
gactcagagcaatggatgcatcacagagtacttcctcctgagctaagggagagagttcgg
cgttacgatcagtacaaatggttggaaactagaggagtggatgaagagagtttggtgcaa
aatctgcccaaagaccttaggagggatattaagcggcatctctgtttgaatttggtcaga
agggtgcccttgtttgagaacatggatgagagaatgcttgatgccatatgtgagcgattg
aaaccaagtttatgcacagaaagtacgtatatagttagagaaggagatccagttggtgaa
atgatgtttataatccgtggtcgcctagaaagtgtaacaactgatggtgggagaagtgga
ttcttcaacagaggtatcctgaaagaaaatgacttctgtggtgaggagctgctaacatgg
gcattggatccaaaatccggttcaaacttgccgccatccactaggacagtcaaggctttg
acagaagtagaggcatttgccttggaggcagaagaagtgaagtacattacatcacagttc
aggcggttgcagagtcgacaggtacaacacacttttaggttttactcgcagcaatggaga
acctgggctgccagcttcatacaagctgcatggcgccggcatacaaggaggaaaatggca
gaacttcgtctccatgaagaaatggaagagaacggatttaatgagaacgatgacggagaa
aatgagttgactccaatgttgtataaatcaccggagcgaccatattag
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