Solanum dulcamara (climbing nightshade): 129895754
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Entry
129895754 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129895754
KO
K15559
regulator of Ty1 transposition protein 103
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129895754
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129895754
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
DUF1397
Microvir_H
Pol_alpha_B_N
Motif
Other DBs
NCBI-GeneID:
129895754
NCBI-ProteinID:
XP_055827494
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Position
1:202328..218753
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AA seq
560 aa
AA seq
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MGDDAFDGQLLAEKLSKLNSSQQSIESLSRWCISYRKKAKQIVETWDKSFRSAQREQRVS
FLYLANDILQNSRRRGSEFVNEFWKVLPASLKEVCETGDESGKKVASRLVDIWEERKVFG
SRGQNLKDEVLGKSPAPSVSNGKSANPIKVVKKDAHSVRIKLSVGCTPEKIVTAFQQVHD
EHVNEEGALTKCKESVFRVGEMENDTENLSSQGNVSELMDKLLEQENILQQCISHFENAE
SLRITLISLLKDALQDQESKLELLRGGMQVACGQIELAKNVRRKLTSPSVASPPLNTGIL
PNEVTRTTEPTLPLVQLTNIPPLPPPPNPVTSFTNSKTNEEESTRSAAAAVAAKLAASTS
SAQMLTSVLSSLVAEEAASLSSGLKSTGFTSSLPFASPEKRLKLDKPMTFSDMNNSERGS
SSYFTSSQQLITSIPLVPSSGMQSVSQPNQIQAPFPPPPPPPPPLHQANSPASQLVQSAA
MMMGVMPYGYSAGLQPPLSSQIAMGLRPPPPPPQQAQQQQLHTQQPQSQQQPASGGFYRP
PGIGFYGQAHQQTTPAAPRQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgatgcttttgatggccagctattggcagaaaagttgtctaagcttaacagt
tcacaacaaagcatagaatctttatcacgatggtgcatttcataccgtaagaaagccaag
cagatcgttgaaacatgggataaatcgttcagatctgcacagcgggagcaacgtgtttcg
tttctgtacttagccaatgatattctccaaaatagtcgacgcaggggtagtgagtttgtt
aatgagttctggaaggtccttcctgcgtctctgaaggaggtttgtgaaactggtgatgaa
agtgggaagaaagtggcttctagactggttgatatatgggaagagagaaaagtatttgga
tccaggggtcagaatcttaaagatgaagtgttgggcaagagtcctgctccgtcagtaagc
aacgggaagagcgcaaatcctataaaagttgtgaagaaggatgctcactcagtacggatt
aaattgtctgttggctgtactccagaaaaaattgtaacagcattccaacaagttcatgat
gaacatgtgaatgaggagggtgctttgaccaagtgtaaagaatctgtttttcgcgttggg
gaaatggagaatgatactgaaaacctctcctcccaaggaaatgtttctgaattgatggat
aaattgctagaacaggaaaatatacttcagcaatgcatcagccactttgagaatgctgaa
tcattgagaattaccttgatttctctgctgaaagatgcacttcaagatcaagaatctaag
ctagagttattacgcggtgggatgcaggttgcgtgtggtcagattgaactagcaaaaaat
gtaaggaggaagctgacatcacccagtgttgcttctccaccattgaatactggtatcctt
ccaaatgaagtgaccagaacaactgaaccgaccctgcctttagtacaattaaccaacata
cctcctctgcctccacctcccaatcctgtgacttctttcacaaattccaaaactaatgaa
gaggaaagcacaaggtcggcagcggcagctgttgctgcaaaacttgctgcttcaacatct
tctgctcaaatgttaacctctgttctttcatcccttgttgctgaagaagctgcgtcactg
agcagtggattgaaatcaactggctttacttctagcttgccttttgcatccccagagaaa
cggctcaagttagataagccaatgactttttctgatatgaacaattctgaaaggggtagc
tcctcttactttacttcctcacaacaattgattactagcattcctctcgtgccatcctca
ggcatgcaatctgtgtcccagcctaaccagatacaagctccgtttccaccacctccacct
cctccaccacctttgcatcaagcaaattcccctgcaagtcagttagttcaatctgcagct
atgatgatgggggtgatgccatatggatatagtgccggccttcaaccacctctgtcttct
caaattgcaatgggactgaggcctcctcctccaccaccccagcaagcacagcagcagcaa
ctgcacactcagcagccacaatctcagcagcagccagccagcggtggattttaccgtcct
cctggtattggattctatggacaggcccatcagcagacgacgccagcagcaccgcgacag
taa
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