KEGG   Solanum dulcamara (climbing nightshade): 129895820
Entry
129895820         CDS       T09577                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129895820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdul03041]
    129895820
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129895820
Spliceosome [BR:sdul03041]
 Complex B
  Other components
   Prp19 complex
    129895820
 Complex C
   Prp19-CDC5 complex
    129895820
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    129895820
SSDB
Motif
Pfam: BCAS2 Spectrin THOC7
Other DBs
NCBI-GeneID: 129895820
NCBI-ProteinID: XP_055827569
LinkDB
Position
7:3937909..3941918
AA seq 251 aa
MATNDGDILMLEAPPESRPAVSSSAEVIDALPYIDDDYGDPNVKEEVDRLVEEEMRRSSK
KPSDFLKNLPPLRKFNFENHPMLAREYERVRAGKPPVQIDTSRYGLEVPPVNKRNDETAW
KQALQKAQRLLQHQVIRLENLDLMAKHGPDVWKLYNQRLEAFLARMKSQAAELNEMIETV
NRERKYHQQTTAYELNALSMQWRELCLKNIEIQSACGELQDHREQLRKEAQERGWNLEAN
VENGKMLYAEL
NT seq 756 nt   +upstreamnt  +downstreamnt
atggcgacaaatgacggcgacattttgatgctagaggcgccgccggagtctcggccggcg
gtttctagcagtgcggaagtgatagatgctttgccgtacattgatgacgactacggtgat
cccaacgtgaaagaagaggtggaccgtttggtcgaagaggagatgcgccgcagctccaaa
aaaccttctgatttcctcaaaaacctccctcctcttcgtaaattcaacttcgagaatcat
ccgatgcttgcgagggaatatgagcgggtgagagctggaaaacctccggtacagatagat
acttcacgatatgggcttgaggtgccgcctgtgaacaagcgcaatgatgaaactgcatgg
aagcaagctcttcaaaaagctcagcgtttactgcaacatcaagtaatcaggctagaaaat
ctggatctaatggcaaagcatggtcctgatgtgtggaagctgtacaatcaacggttggag
gcatttttagccagaatgaaatcacaagctgctgaactgaatgaaatgattgaaacagta
aacagggaaaggaaatatcatcagcaaactactgcatatgagctcaatgcgttgtccatg
caatggagagagctctgtctgaaaaatatagaaatccaatctgcatgtggggaactacaa
gaccacagagaacaactgaggaaggaggctcaagagagggggtggaatttggaggctaat
gttgagaatggcaagatgctgtatgcagaattatga

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