KEGG   Solanum dulcamara (climbing nightshade): 129895873
Entry
129895873         CDS       T09577                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04142  Lysosome
sdul04144  Endocytosis
sdul05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129895873
   04142 Lysosome
    129895873
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    129895873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129895873
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdul04147]
    129895873
Membrane trafficking [BR:sdul04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    129895873
Exosome [BR:sdul04147]
 Exosomal proteins
  Proteins found in most exosomes
   129895873
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B IcmW
Other DBs
NCBI-GeneID: 129895873
NCBI-ProteinID: XP_055827625
LinkDB
Position
7:30895342..30908449
AA seq 1702 aa
MAAANAPITMKEAITLSSIGVNPQFITFTNVTMESDKYICVRETSPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTAQDHLQIFNIEAKQKMKSHQMPEQVVFWKWI
TPQILGIVTQTSVYHWPIEGDTEPIKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLYSVDQQRSQSLEAHAASFASFRVPGSDRDSILISFATKSLNAGQVIS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVSMQISHKYSLVYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSIGGFYAINRRGQVLLATVNEATIIPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTSDTVAKFQSVPVQ
PGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQALVEFFGTVSREWALECMKDLLVINIKGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYDGLYFFLGSYLSSSEDPDIHFKYVEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEFRRQLIDQVVSTALPESKSPEQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADSSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAANVLLDNIHDINRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDTTQFLDVIRAAEDADVYHDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLAITLVKLNQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPDAWDHMQFKDIAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESVDL
HDSFDQIGLAQKIEKHELLEMRRVAAYIYKRAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQSEAKAKENEEKDVMKQQNMYAQLLPLALPAPPMPGMGGGFAPSQP
PPMGGMGMPPMPPFGMPPMGPY
NT seq 5109 nt   +upstreamnt  +downstreamnt
atggcggctgctaatgctccgatcacaatgaaagaggccattacattatcaagtataggg
gtcaacccgcagttcatcactttcacaaatgtaaccatggaatcagacaagtatatttgt
gttcgggagacatcaccacaaaatagtgtggtgattattgatatgaatatgccaatgcag
cctttgcgccgccctattactgcagactctgctcttatgaatcctaattccagaattttg
gctctaaaagctcaagtaccaggaactgctcaagatcacttacaaattttcaatattgag
gcaaagcagaaaatgaagtcacatcagatgcctgagcaggttgttttctggaagtggatt
accccacagattttaggtatcgtcacacaaacgtcagtctatcattggccaattgaaggt
gatactgagcctataaagatgtttgatagaacagccaatctagccaataatcaaataatc
aattatcgttgcgatccttcagagaaatggttggttttgatcggtattgccccaggttcg
ccagagaggccccaactcgtcaaaggaaatatgcaattatattcagtggatcagcagcga
agtcaatctctagaggcacacgctgcatcatttgcatcattcagagtacctggaagtgat
agggattccatactcatttcctttgccacgaaatccttgaatgctggacaggttatatca
aaattgcatgtcattgagctgggagctcagccagggaaaccttcatttacgaaaaaacag
gcggatcttttcttccctccagattttgctgatgatttcccagtttccatgcagatatct
cacaagtatagtttagtttatgtcatcacaaagcttgggcttctttttgtctacgacctg
gaaacagctactgcggtatacagaaataggattagcccagaccctattttcctgacagct
gaagcttcgtcgattggtggtttctatgccatcaacaggcgaggccaagtgttgctagcc
acagtaaatgaagcaactattataccttttgtcagtggccaattgaacaatctggagctt
gctgtcaatcttgccaaaagaggaaaccttcccggtgctgagaatttggttgtccagcgc
ttccaagaattgtttgctcaaaccaagtacaaagaggctgctgagcttgctgcggaatca
cctcagggcatactccgtacgtctgatactgttgccaaatttcagagcgttcctgttcaa
ccagggcaaacacctcctcttttgcagtactttgggacacttttgacaaaagggaagctc
aatgcttttgagtcattggaactgtcacgccttgttgtcaaccaaaataagaagaacctt
ttggagaactggttagctgaggataagctggagtgcagtgaggaacttggcgaccttgtg
aagactgttgataatgatctcgccttgaagatatacatcaaagcaagagcaactccaaaa
gttgttgctgctttcgctgagcgcagggagtttgacaagattctgatatattccaagcag
gttggctatactcctgactatctgttcctcctgcaaacaattcttcgatctgatcctcag
ggagctgttaacttcgcactcatgatgtcccaaatggagggtggttgtccagttgattat
aatacaatcactgacctttttctacagaggaacatgatccgcgaggcaacagcatttttg
ttggatgttctgaaacctaaccttccagaacatggtttcttgcagactaaggtattggaa
atcaatcttgtgactttccccaatgtagcagatgctatattagcaaacggaatgttcagt
cactatgatcgacctcgaattgctcaactttgtgaaaaagctggtctatacgtgcgggct
ctgcagcactatactgaactccctgatattaagcgtgtcattgtgaacacacatgcaatt
gagcctcaggctttggttgagttctttgggactgtttcacgtgaatgggctctcgaatgc
atgaaggacctgctagtgatcaatatcaaaggcaaccttcaaataattgttcaggtagcg
aaagagtactgtgagcagttgggtgttgatgcctgtataaagctttttgagcaattcaag
tcttatgatgggttgtacttcttcttgggatcatatttgagttccagtgaggatcctgat
attcacttcaagtatgttgaggctgctgccaagactggacaaataaaagaagttgagcgt
gtgacaagagaatctaacttttatgaccctgaaaagacgaagaacttcttgatggaagcc
aaacttcctgatgctcggcctctaattaatgtttgtgaccgttttggttttgttcctgat
ctcacacactacctctataccaataacatgctacggtatattgaaggttatgtccaaaag
gtcaacccaggaaatgctcctttagttgtgggacagctattggatgatgagtgtcctgag
gattttattaaaggcttgatcctttctgttcgttctctgctacctgttgagccccttgtg
gatgaatgtgaaaagaggaaccgcctccgactgcttactcagttcttggagcatcttgtg
agtgaaggaagccaagatgtgcatgtacacaatgctctgggtaagatcatcatagatagc
aacaataacccagagcacttcctgacaaccaacccatactatgattcacgtgttgtgggt
aaatattgtgagaagcgcgatcctacccttgctgttgttgcatataggagaggacaatgt
gatgacgaacttattaatgtaaccaacaagaactctttgttcaaattgcaagccaggtat
gtcgttgagaggatggatggtgacctttgggagaaagttcttaaccctgaaaatgagttc
agaaggcagcttatcgatcaagttgtctccactgctctgcctgagagcaaaagcccagaa
caagtttctgctactgttaaagctttcatgactgccgatcttccacatgaactgattgag
cttcttgaaaagattgtcctccagaactctgcattcagtgggaactttaatctgcaaaac
ttgctcatcttgacagccattaaagctgattcatctagagtcatggattatatcaacagg
cttgataattttgatggacctgcagtaggagaggtagctgtagaagcccaactttatgaa
gaagcttttgcaatcttcaagaagttcaatttaaatgtccaggctgccaatgttctgcta
gataatattcatgatataaatcgtgctgtcgagtttgccttccgagttgaagaagatgct
gtttggagccaagtggctaaagctcaactgagagaaggattagtcagtgatgctattgag
tcatttattcgtgcagatgataccacccaatttttggatgtcattcgtgctgcagaggat
gctgatgtttaccatgacttggtgaagtatctgctgatggtaaggcaaaagacaaaggag
cccaaggttgacagtgaactaatatatgcatatgctaaaatagatcgattgagtgacatt
gaagagtttattcttatgccaaatgttgccaatctaccgaatgttggtgaccggttgtat
gatgaagccttatatgaggctgcaaagatcatatttgcttttatttctaactgggccaaa
ttggctatcacacttgtgaagctaaatcaatttcaaggtgctgtagatgctgcacgcaaa
gcaaatagttcaaaaacgtggaaagaagtctgctttgcttgtgtcgacgctgaagagttc
cgcttagcccagatttgtgggcttaacattatagttcaggtagatgatctggaggaagtg
agtgaatattaccaaaacagaggatgtttcaatgaattgatctcccttatggaaagtggg
cttggtttggagcgagcccatatgggtatcttcacagaacttggtgtcctttatgccaga
taccgttatgagaagctcatggaacatataaaattattttccacccgtctcaacattccc
aagcttattcgtgcctgtgatgagcagcaacactggaaagaactaacttatttgtatatc
caatatgatgaatttgacaatgctgccactaccgtcatgaatcattctccagatgcttgg
gatcatatgcagttcaaagacattgctgtcaaagttgctaatgtggagctttattacaag
gccgtccacttttatttgcaagaacatccggatctcatcaatgatcttcttaatgttctt
gcacttagggtggaccacacccgtgtagtcgacataatgagaaaggctggtcatcttcgc
ctagtgaagccttacatgatcgctgttcagagtaacaatgtttctgctgtaaatgaggcc
cttaatgagatatatgttgaagaggaagattatgatagattacgcgaatcggtagatttg
catgatagctttgaccagattggtcttgcacagaagatagagaaacacgagcttcttgag
atgaggcgtgttgctgcttatatctataaaagagctggtcggtggaaacaatccattgct
ctgtcgaagaaagataatctttacaaagatgcaatggagactgcctcacaatctggggat
cgtgagcttgctgaagagttgcttgtttacttcattgaacagggaaagaaagaatgcttc
gcgtcgtgtctgtttgtttgttatgatttgattcgcccggatgttgcccttgagctagcg
tggatgaataatatgatcgactttgcattcccttacttgttacagtttattcgtgaatat
accggcaaggttgatgagctgataaaagataaaatagaggctcaaagtgaagcaaaagcc
aaagagaatgaagagaaggacgttatgaagcagcagaatatgtatgcgcagttgctgcct
ctggctttgcctgctccaccaatgccgggtatgggaggaggttttgctccatcccagcca
cctccaatgggtggaatgggaatgcctccgatgcctccatttggtatgccacccatgggt
ccctactaa

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