Solanum dulcamara (climbing nightshade): 129895887
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Entry
129895887 CDS
T09577
Name
(RefSeq) ABC transporter B family member 28 isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129895887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdul02000
]
129895887
Transporters [BR:
sdul02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
129895887
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_16
AAA_30
ABC_ATPase
AAA_5
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_28
AAA_25
AAA_33
Rad17
AAA_15
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
129895887
NCBI-ProteinID:
XP_055827643
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All DBs
Position
7:20423110..20449472
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AA seq
718 aa
AA seq
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MATVPNTFCLPLTPFTTQRRRNHRVLPHRFNGPPQFSISSTQPFRSQFVSCRRKMKRFVI
SSAYITGPAFDAFVSENDPKVEETDNSLVAVQPIEIIRWGFLWKLISRHKLRLLASVFSL
VVCTTCSLTLPLLSGRFFEVLIGTRSDPLLELLSKVGLLYTLEPIFTVIYVVNMNSIWEK
VMSSLRAQIFQRVLIQKIDFFDRYKVGELTALLTSDLGSLKNIVSENTSRDRGFRALSEV
VGTLSLLFVLSPQLAPILGLLMLAVSILVALYKRSTVNVFKAHGLVQASIADSVTESFSA
IRTVRSFSGEKRQMSVFARQVLEYESSSIKIGTFKSFNESVTRVAIYISLMALYCLGGSK
VKAGELSVGIVASFIGYTFTLTFAVQGLVNTFGDLRAALAATERINSVLSDAEIDEALAC
SLEKDMKQKQVHDETLELYLVNDSNDKMQSTKTRYMSTLKFGSSVRNLAETGDICLEDVD
FSYPVRPDVEILRGLNLTLKCGTVTALVGPSGAGKSTVVQLLARFYEPTRGRITVAGEDL
RTFDKSEWARVVSIVNQEPVLFSVSVGENIAYALPDEYVSKDDVIKAAKAANAHEFIISM
PQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSSLDTISERLVQEALDHL
MKGRTTLVIAHRLSTVQNADQIALCSDGKIAELGTHLELLGRKGQYASLVDTQRLAFE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtacccaacaccttctgtctccccctcacccccttcactacccaacgccgg
cgcaaccaccgagtgttaccccaccgtttcaatggacctcctcagttctctatttcatca
acacaaccatttcgctcacaatttgttagttgccgccggaaaatgaagcggttcgtcata
tcttccgcttacattacgggccctgcttttgatgcttttgtttcagaaaacgatcctaaa
gttgaagaaacggataatagtttagtagcggtacagccaattgaaattatccgttggggc
tttctgtggaaacttatttctcgccacaagttaaggctccttgcttctgttttctctctt
gtcgtctgcaccacttgttctctcaccctgcctttactttccggaaggttttttgaggta
cttattggaacaagatcagatcctctgttggaactgctcagtaaagtgggacttctatat
acactggagccaatttttacagttatctatgtggtgaacatgaattccatttgggagaag
gttatgtccagcttaagggctcaaatttttcagagagtactgattcaaaagattgacttt
tttgaccgttacaaggttggtgaattaacagctctattaacatctgatctgggttctctc
aaaaatattgtcagtgagaatacttcacgggatcgtggttttagggcactatcagaggtg
gtgggaacattatccttattgtttgttctatctccccaacttgcaccgattctgggctta
ctcatgctcgcagtgtctattttagtcgctctgtacaagaggtcaactgtaaatgtcttc
aaagctcatggactggtccaagcatcaatagctgattctgtgactgaatcattttctgcc
attcgcactgtgaggtcatttagcggggagaagcgtcagatgtcagtatttgctcgccag
gtacttgagtatgaaagtagtagcataaagattggaaccttcaaatccttcaatgagtca
gtgacgagagtggcaatttatatctccttgatggctttatattgtcttggtggaagcaaa
gtaaaggcaggtgaattatcagtgggaattgtggcttcatttatcggatatacatttaca
ttgactttcgcagttcaaggccttgttaatacctttggagaccttcgtgcagctcttgca
gcaactgagagaattaactctgttttatccgatgctgaaattgatgaagcacttgcatgt
tctttagagaaagacatgaagcaaaagcaggtccatgatgagactttagaattgtacttg
gtgaatgattctaatgataaaatgcaatctaccaaaacaagatacatgtctacactaaaa
tttggtagcagtgtgcgaaacctggcggagaccggtgatatctgtcttgaagatgtagat
ttctcatatccagtgaggcctgatgtggaaatccttcgtggtcttaatttaaccctaaaa
tgtggaactgttacagctctggtgggaccaagtggtgcagggaaaagtacagtagtacag
ctattggcgcgtttctatgagccaactcgaggtcgcataactgttgcaggagaagatttg
cgaacatttgataagagcgagtgggcgcgggttgtctctatagttaatcaagaaccggtt
cttttctctgtatcggttggagaaaatattgcttatgctctccctgatgaatatgtatcc
aaggatgacgtgataaaggcagccaaggctgccaacgcacacgagttcataatttcaatg
ccacagggttatgacacattggttggtgaacgtggtggtttattgagtggtggacagagg
cagcgaattgctattgcaagggctctactgaagaatgcccctattttgattcttgatgag
gccactagttctttagacacgataagtgagcgtctagtccaagaagccctggaccatctg
atgaagggacgaacaactttggtaattgctcacagattgagcaccgttcagaatgcagat
caaattgctttgtgttctgatgggaagattgcagagttgggaacacatttagagttgttg
ggaaggaagggtcaatatgcttctctggttgatactcagaggctcgcatttgaataa
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