KEGG   Solanum dulcamara (climbing nightshade): 129895902
Entry
129895902         CDS       T09577                                 
Name
(RefSeq) ubiquitin receptor RAD23b isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03420  Nucleotide excision repair
sdul04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129895902
  09124 Replication and repair
   03420 Nucleotide excision repair
    129895902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:sdul03051]
    129895902
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129895902
Proteasome [BR:sdul03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    129895902
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      129895902
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE TECR_N UBA_3 Ubiquitin_2 HEPN_Toprim_N UBA_RAD5A
Other DBs
NCBI-GeneID: 129895902
NCBI-ProteinID: XP_055827662
LinkDB
Position
7:5005789..5011113
AA seq 366 aa
MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLL
ENNVSEDGFLVVMLSKSKTASSSGTTSAQQPATAANPTTTPEVIPPSQATKDVVSASDAV
TASLPTAAYSQTASNLVAGNNLEQTIQQIMDMGGGSWDKETVTRALRAAYNNPERAVDYL
YSGIPETAEVAVPVARGGVNSAPATTAAPTAPSSGAPNSAPLNLFPQENVAGAGGAGLGS
LDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRSIQEHDQEFLQLINEPVDGS
DGDMFDQAEQEIPHTVSVTPEEQEVIERLEAMGFDRALVIEAFLACDRNEELAANYLLEH
AGDYED
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaagctcactgtaaagactctcaaaggcagtcactttgaaattagggttcagccatct
gatacgattatggcagtcaagaaaaacattgaagatatacaaggaaaagataattaccca
tgtgggcagcagttgctgattcacaatggtaaagtgctgaaggatgaaagtacactattg
gaaaacaatgtctctgaagatggttttctcgttgtcatgcttagcaagagcaaaactgct
agctcaagtgggacaacatctgcacagcagccagctactgcagcaaatcctactacaaca
cctgaagtgattccgccatcacaggccacaaaagatgttgtgtcagcttcggatgcggtg
actgctagtcttccaactgctgcttatagtcaaactgcatctaatctagttgctggcaat
aatctcgagcaaacaatacaacaaattatggatatgggcggtggcagctgggacaaagag
acagttacacgtgcacttcgagctgcttataacaatcctgaaagagctgttgattactta
tattcaggaattcctgaaacggcagaagttgccgtaccggtggcccgaggtggagttaat
tctgctcctgcaactactgcagcgcctactgcaccttcttctggcgcacctaattctgct
cctttaaatttgtttcctcaggagaatgttgctggtgctggcggtgctggtcttggatcc
cttgattttctcaggaacaaccaacagttccaagctttacgttctatggttcaagctaac
ccacaaattttacagcctatgcttcaggaactaggaaagcaaaatcctcaacttttaaga
tctatacaggagcacgatcaagagtttcttcaattaatcaatgaacctgtggatggttct
gatggggacatgtttgatcaggctgagcaagagattccccacacagttagtgtcactcca
gaagagcaggaggtgattgagcggctggaagcaatgggttttgatagagctcttgtcatt
gaagcttttttggcttgtgatcgcaatgaggaactggccgctaattatctgttggagcat
gcaggagattacgaagattaa

DBGET integrated database retrieval system