KEGG   Solanum dulcamara (climbing nightshade): 129896011
Entry
129896011         CDS       T09577                                 
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta 1-like isoform X1
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:sdul01006]
    129896011
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129896011
Enzymes [BR:sdul01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     129896011
Prenyltransferases [BR:sdul01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   129896011
Membrane trafficking [BR:sdul04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    129896011
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    129896011
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_N SQHop_cyclase_C
Other DBs
NCBI-GeneID: 129896011
NCBI-ProteinID: XP_055827800
LinkDB
Position
7:complement(4335996..4340437)
AA seq 340 aa
MGELLVGKHVKYIITVEKRKDDFESVVMEHLRLNGAYWGLTTLDIMGKLAAVEQDEVISW
VMQCQHGSGGFGGNIGHDPHVLYTLSAIQVLALFDKLHILDIDKVSNYIAGLQNEDGSFS
GDIWGEVDTRFSYISILSLALLHRLDKIDVGKAVKYILSCKNVDGGFGCTPGAESHAGQI
FCCVAALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSCYIEISIDKLVL
SVTDSRVVAPQVCYSWWVLSSLIMIDRVHWIDKKKLVKFILDCQDKENGGISDRPDDAVD
VFHTYFGVAGLSLLEYPGIKPIDPAYALPVDVVNRVMLGR
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgggggagctgttggtgggaaagcatgttaagtacattataacagttgagaagaggaaa
gatgattttgaatctgtggtgatggagcatttgagattaaatggggcatactgggggttg
acaactctggatatcatgggcaagcttgctgctgtggagcaagatgaagttatttcatgg
gtcatgcagtgccaacacggatctggtggatttggtggtaatattggacatgatccgcat
gtgttgtatacacttagtgctattcaagtcttggcgttatttgataaattacacatcctt
gacattgataaggtgtcaaattatattgcaggcctgcaaaatgaagatgggtcattttct
ggcgatatatggggtgaagtcgatacacggttctcttacatttcaatcctttcactcgca
ttgctgcatcggttagataagattgatgttggaaaagcagtgaaatatattttaagttgc
aagaatgtggatggtggatttggatgcacacctggagcagaatctcatgcggggcaaatt
ttctgttgcgtggcagctctcgcaattacaggatctctacatcatgttgataaggacctc
cttggttggtggttatgtgaaagacaagtcaaatctgggggtctaaatgggcgcccagag
aagcttcctgatgtttgttactcttgctacattgaaatttctatcgacaagttagtttta
agtgttactgatagtcgtgttgttgctcctcaggtctgctactcttggtgggttctttcc
agcttaatcatgattgacagggttcattggattgacaaaaaaaagcttgtaaagtttatt
ttggactgtcaggataaggagaatggtggaatttcagataggccagatgatgcagttgat
gtcttccatacttactttggagttgctgggctttcgcttcttgaatatccaggaataaag
ccgatagatcctgcttatgccttgcctgttgatgttgtaaaccgagttatgcttggcaga
taa

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