KEGG   Solanum dulcamara (climbing nightshade): 129896166
Entry
129896166         CDS       T09577                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129896166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129896166
   03041 Spliceosome [BR:sdul03041]
    129896166
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     129896166
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129896166
Spliceosome [BR:sdul03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    129896166
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_RdRP1_2 OB_RNB
Other DBs
NCBI-GeneID: 129896166
NCBI-ProteinID: XP_055827979
LinkDB
Position
7:complement(1334517..1338917)
AA seq 369 aa
MDYDVAEQNVAVEEQERNDGSAGHELKHSNDDSSAGKLFVGGIAWETREESFRKYFSSFG
EITDCVIMMDKVSGRPRGFGFVTFADPEAANKVLEEDHVIDGRTVEVKRTVPKEDMQVKG
APKTKKIFVGGLPISLTEDELKEYFSSYGHVLEQQIMLDRESGRSRGFGFVTFDSENAVE
KVLNNGRMHEIHGKQVEIKRAEPKRAGAEHANESRQHRGGSGSRSYNSFGGSEASYGGGY
GRGYGGYGGYGDGGGYGGYGNIGGGYGGGGAGYFSGYGGYGYGFGFSGPMYGAAGYGGTS
YGAPGSYGGAAGYAGGRGYTSGDDASWYGGARGSVSFNAKGYDTGGSTGGAKAYGNGGAA
GGRFHPYRN
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggattatgatgtagctgaacaaaatgttgccgtagaagagcaggaacgaaacgatggt
agtgcaggacatgaattaaagcattcaaacgatgattcttctgcaggaaagcttttcgtc
ggcggcattgcttgggagactagagaagaatcttttaggaagtatttcagcagttttgga
gagataacagattgtgtaataatgatggataaggtctctggaaggccacggggattcgga
tttgtaacatttgcggacccagaagctgcaaataaggttttagaggaagaccacgtcata
gatggtagaacggtggaagtgaagaggacagtacctaaggaggacatgcaagttaaagga
gctccaaaaacaaagaaaatttttgtcggcggtcttccaatatctctaactgaagatgag
ttgaaggaatatttttcttcttatggccatgttctggagcaacaaatcatgctggaccgc
gagagtggtcgatcccgaggatttggctttgttacttttgatagtgaaaatgccgtggaa
aaggttttaaacaatggccgtatgcacgaaatccatggaaaacaagttgaaattaagagg
gctgagccaaaaagagctggtgctgaacatgcaaatgagagcaggcagcatcgtggtggc
agtggttcaagatcgtataatagctttggtgggtctgaagcctcgtatggtggtggatat
ggtagagggtatggtggatatggcggctatggcgacggcggcggctatggtggttatgga
aacattggaggaggttatggtggaggtggggcaggatatttctctggatatggtggatat
ggttatggatttgggtttagtggacctatgtatggggcagctggatacggaggcactagc
tatggtgctcctggtagctatggtggtgctgctgggtatgctggcggcagaggatataca
agcggtgatgatgctagctggtatggtggggctagaggctctgtatctttcaatgctaaa
gggtatgacactgggggtagcactggaggtgctaaagcatatggtaatggtggtgctgca
ggcggaaggtttcatccttacaggaattga

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