Solanum dulcamara (climbing nightshade): 129896483
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Entry
129896483 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129896483
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129896483
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129896483
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GFIT
Motif
Pfam:
LRR_NXF1-5
F-box
LRR_6
F-box-like
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
129896483
NCBI-ProteinID:
XP_055828379
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Position
7:complement(5476988..5479126)
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AA seq
582 aa
AA seq
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MANRCKDLPVECWELIFNRLHHKSDFESFSLVSKQFLALTNRLRIGLSVIDSTLLMHGTI
SKLIHRFPNLNSIDLSKFSGDLDPVLVDLANSVSYTSNLEQLDISNHKKLPFKGLQELGR
KLKGLRVLTCSNLTLLRDSDLYVIAQLFPFLEELDISYPSTDYVLDSVYIASEASNLGVT
DSGIEVLSVNLSSLRKINVSGNHLITDRSLVALSINCLNLEGVEIDDCPFITLKGILSVL
RTCAALSWISVSEIHIAQSSSGFECLSTSRRTLQKLEVSNSIITDEFLIMVANASLPLYT
LSLCWCTGFTFSGISKLLCAYQSLKFLSLVQVDFLIDECMNDLSQYLQCIVTIDLSGCGR
LTNLTFYTLARNCPSLQEVFMENTGFGTKDCFHNGVRNPRIRAVNLASNRYLDDDSLMNV
ALMCPNMEFLDVISCTSLTEAGIIAALEVCNQIRDLQLDNCAGIKHIGKGTELPNLEVIS
AAGSALNDEGLAMIGNRCSRLLKLNLENCKGVTAEGLHTMMKNCRSLREINLKKCPQVSI
NSLNSLVFSSSSLRRVIPPCCSAFTDSLRGLYLHHGCRVYSG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcggtgcaaggatttgcctgtagaatgctgggaactgatattcaatcgtcta
catcacaaatccgactttgaatcgttttctctggtgtccaaacaatttcttgctctcact
aatcgtctaagaataggtttgtcggtgatcgattccactctgctcatgcacggtaccata
tctaaactcattcaccgatttccgaatcttaattccattgatcttagtaagttcagcggt
gatcttgatcccgttctggttgatcttgccaattccgtatcatatacatccaatcttgaa
caacttgatatctccaatcataagaaattaccctttaaagggttgcaggaattggggcgg
aaattaaagggtttgagggttttgacgtgtagcaatctaactcttttgcgtgactctgat
ttgtatgttattgctcagttgtttccgtttctggaagagttagatattagctatccgagt
acggattatgtgttggattctgtatatattgcttcagaggctagtaatttgggtgtgact
gattctgggattgaggttttgtcggtgaatttgagtagcttgcgtaagatcaatgtttct
gggaatcatttgattactgataggtctcttgttgcactttctataaattgtttgaattta
gaaggcgttgagattgacgattgcccttttattactctaaaagggatcctttctgtactg
cgtacttgtgctgctttgagttggatttcagtgtctgagattcacattgctcaatcgagc
tccggttttgaatgtttgtctacttctagacgaactttacagaaactcgaggtttccaac
tcgattatcacagatgaattcctcatcatggtggccaatgcttctctccctctatatacg
ctttcactttgttggtgtacaggtttcacattttctggcatctctaagctgttgtgtgca
taccagtctttgaagttcttatctttggttcaagtagattttttgattgatgagtgtatg
aatgatttatcccaatatctacaatgtattgttaccattgatctcagcggttgtgggaga
ttgaccaatttgacgttctacacacttgcaagaaactgtccttcactacaggaagttttc
atggaaaatactggttttgggacaaaggattgttttcataatggtgtaaggaacccgaga
atcagggctgttaatttggcaagtaaccggtacctagatgatgactctctcatgaacgtt
gctttgatgtgccccaacatggagtttcttgatgtgatatcgtgtactagccttacagag
gcagggattattgctgctcttgaggtgtgcaatcagataagggatttgcaacttgataac
tgtgcagggattaaacatattggaaaaggcacggaattgcctaatcttgaggtcattagt
gcagctggttcagcattaaatgatgaaggcctggccatgatcggaaatagatgttctcgc
ctgctgaaactaaacttggagaactgcaaaggagtgacagcagagggcttacatacaatg
atgaaaaattgtagatcattgagagagataaacttgaagaagtgtcctcaagttagtatc
aattctctaaatagtttggtgttttcgtcttcatcactaaggagagtaattccgccctgt
tgctctgcttttactgatagcttgaggggactttacttgcaccatggatgtcgagtatac
tcaggctag
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