Solanum dulcamara (climbing nightshade): 129896561
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Entry
129896561 CDS
T09577
Name
(RefSeq) protein transport protein SEC13 homolog B-like
KO
K14004
protein transport protein SEC13
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
sdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129896561
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129896561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129896561
04131 Membrane trafficking [BR:
sdul04131
]
129896561
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129896561
Membrane trafficking [BR:
sdul04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
129896561
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
129896561
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
129896561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
129896561
NCBI-ProteinID:
XP_055828472
LinkDB
All DBs
Position
7:60420385..60423279
Genome browser
AA seq
302 aa
AA seq
DB search
MPAQKIETGHNDIVHDVSMDYYGKRVATASSDMTIKIVGVSNNSASQHLATLSGHTGPVW
QVAWAHPKFGSVLASCSYDGKVVIWKEGNQNEWTQAHVFSDHKSSVNSVSWAPHELGLCL
ACGSSDGSISVHTARSDGLWDTTKIDRAHPVGVTAVSWAPSMAPGALVGSGVVEPVQKLA
SGGCDNTVKIWKLYNGIWKMDCFPALQMHTYWIRDLAWAPNLGLPKSTIASASEDGTVVI
WTVAKEGDQWEGKVLKNFKSPVWRVSWSLTGNLLAVAAGDNNVTLWKEAVDGEWQQIPSL
DQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacagaagattgaaacaggtcacaatgacatagttcatgatgtttccatggac
tattatgggaaacgtgtggcaacagcatcatctgatatgaccataaaaatcgttggagtc
agcaacaactcagcttcacagcaccttgctactctgagtggtcatactggtcctgtttgg
caagttgcttgggcacaccccaaatttggctcagttcttgcttcctgctcctatgatggt
aaagttgtaatctggaaggaaggaaatcaaaatgagtggacacaagctcatgtttttagt
gatcataaatcatcggttaactctgtttcatgggctcctcatgaacttgggctttgcttg
gcttgtggttcttctgatggtagtatctcagttcacactgctaggtcagatggtctttgg
gacactacaaaaattgaccgagcccatccagttggggtaacagctgtttcatgggcgccg
tcaatggctccaggtgctttagttggttcaggtgttgttgaacctgttcagaagctggca
tctggtggatgtgataacactgtgaagatttggaagttatataatggcatttggaagatg
gattgcttccctgcactgcagatgcacacttactggatacgggatttagcctgggcacca
aatttgggacttcctaaatcgacaattgctagtgcttcagaggatggtacagttgtcata
tggactgtggcgaaggagggagatcagtgggaaggaaaggttcttaaaaacttcaagtct
cctgtttggagggtttcatggtctctgaccggaaacttgttggctgtggctgctggggac
aacaatgttacattgtggaaagaagcagttgatggggagtggcaacagatcccctctctc
gaccaatag
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