KEGG   Solanum dulcamara (climbing nightshade): 129896637
Entry
129896637         CDS       T09577                                 
Name
(RefSeq) DNA polymerase epsilon subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03030  DNA replication
sdul03410  Base excision repair
sdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129896637
   03410 Base excision repair
    129896637
   03420 Nucleotide excision repair
    129896637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdul03032]
    129896637
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129896637
Enzymes [BR:sdul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     129896637
DNA replication proteins [BR:sdul03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    129896637
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      129896637
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE Peptidase_M16
Other DBs
NCBI-GeneID: 129896637
NCBI-ProteinID: XP_055828545
LinkDB
Position
7:complement(12437736..12443519)
AA seq 528 aa
MSGVLRNKVQRKFKMRGYSLKVEALSEVLSFLSHFPSDALDDALELLLDELHHLSLKSSI
LDREPVHKVVSILLEADAAVEENPSSSSSSASALRVIDAFIVPKFRYDPVKKFFHEHTGR
LPIHGDASAKATLYKDRFLLLFQRLARDPRFSTLAFDASSDYGSCEISPIQSLVGRVGRR
WIMGVISQLEDGHFYLEDLAAAVEVNLSSAKITTGFFAENTIVLAEGEMQLDGVFQVRTC
GFPPLEDREKSMAFFSGLDFFGGGILTKEETLRLAELEKNAVNDMFVILSDIWLDNEETL
GNLETILNGYENVEVVPSLFVFMGNFCSQPFNISFKSISSLRVQFGKLGEMIASHQRLKE
HSRFLFIPGPDDVGPSTALPRCPLPKYLAEELQKYVPNAIFSSNPCRIKFYTQDIVLFRH
DMLYRMRRSCLIPPSTEETSDPFEHLVATIIHQSHLCPLPLTVQPIIWNYDHGLHLYPTP
HTIVLGDKSEQKSFRYTGVTCFNPGSFSNDGTFVAYRPCNQEVELSAL
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgagtggagttttaagaaacaaagtacagagaaagttcaagatgagaggttactctctc
aaagtagaagctctctccgaagtcctctctttcctttcccattttccctcagatgctctc
gacgatgctcttgaactccttctcgatgagcttcaccatctttcattgaagtcttcgatt
ttggatagggagccggtgcataaagttgtgagcattttattggaggcagatgccgccgtt
gaagagaaccctagctcaagttcttcatctgcttctgcccttcgtgttattgatgctttt
attgtccctaaattccgatacgaccctgttaagaagttctttcatgagcacacagggagg
cttcccattcatggtgatgcctctgcaaaagccaccttatacaaggatagattcctctta
ttgtttcaaaggttagctcgtgatccacggttttcaacccttgcttttgatgcctcttct
gattatggcagctgtgagatatctcccattcaatcccttgttggaagagtaggccggaga
tggataatgggagtaatatctcagttggaggatggtcatttctacttggaagaccttgct
gctgctgtcgaagtaaatttatcgagtgcaaagataactacaggtttctttgcggaaaat
acaattgtcctggcagaaggtgaaatgcagttggatggtgttttccaggtcagaacatgt
ggatttcctccattagaggacagagaaaagtccatggcatttttttcaggacttgacttc
tttggtggtggtattcttaccaaagaggaaactctaaggcttgcagagctggagaaaaat
gctgtaaatgatatgtttgttatactatctgatatatggctggacaatgaggagactttg
ggaaatctggagacaattctcaatggttacgaaaatgtagaggtggttccttctttattt
gtcttcatgggaaacttctgctcgcagccatttaatatttcattcaagtccatctcaagt
ctcagagttcagtttggaaagcttggggaaatgattgcatcgcaccaacgactaaaagag
catagtcggtttctttttatccccggtcctgatgatgtaggtccttcaacagccttaccc
agatgtcctttgcctaaatacctagctgaagaacttcagaaatatgttccaaatgcaata
ttctccagtaacccatgcagaatcaagttttatacacaagacattgtgctattccgccat
gatatgctttatagaatgcgaagatcgtgtctgatacctccctcaacagaagaaaccagt
gatccatttgagcatcttgttgcgactataatacatcaaagccatctctgccccctccct
ttgacggttcaacccattatctggaattatgatcatggtctacacctatatccaaccccg
catacgatagtgttgggggacaaaagtgagcagaaatctttcagatacacaggagttaca
tgctttaatcctggttccttctcaaatgatggcacatttgtggcataccggccatgcaat
caggaagtagaattatcagcattgtaa

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