KEGG   Solanum dulcamara (climbing nightshade): 129896756
Entry
129896756         CDS       T09577                                 
Name
(RefSeq) DNA repair protein RAD5B-like
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129896756
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    129896756
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX DEAD zf-RING_2 zf-C3HC4_2 ResIII zf-C3HC4_4 zf-RING_5 Prok-RING_4 zf-RING_4 RING_XB3-XBAT31 CUE zf-ANAPC11 UBA
Other DBs
NCBI-GeneID: 129896756
NCBI-ProteinID: XP_055828693
LinkDB
Position
7:complement(78632036..78639898)
AA seq 1144 aa
MEMEANVEENDNKIKMIRSIIGSEIPENEILEALSQKNNNPEASINHLLDSSPTLAIHKT
VTSTGVRISAPIKQENGEESLGCGFKVKEEPDVGIDEKWGKKVFDGCGAKGSVGKWDSGC
EMVNGLKVKEESNVVDEEKGQKEEEKKVFNLPDLEKEFHEWLKLPENNPQIDIQKPKEEK
KLEMVKFKEEPVLFVEPLSARPLSKQEYNRLNSSSSSNRVIGGIKEKMGIEKNSLSTVMI
EDRDFPEDSDWLLVGRTVVTGLSTTKGRKLENNEIVHFSFPQSGSSKHSSQWGGSRAAIA
AASSIVRFSTKRSGEIGRLPMEWAKCLIPLVSSSKVKVLGRCVAAPVNLSLMQELMLYVS
FYIHHSVFTSCDKSSWRLDSPSQIDTTTYPLLTLFKLLKVKPFQNAEFTPDELDSRKRQL
NLDSDSNEAASVLSIAKRRKGCQQYSEPNKDEQAISEASINKLVGSVDMYDLKEMEAPDT
LMCSLRPYQKEALYWMSESEKGAGVDEASKTLHPCWAAYRICEERKIYVNIFSGEATTDF
PTASNAARGGILADAMGLGKTVMTIALILANLGRSSLDDQEIVSEDTDETECVTKRITYT
DTEFSRKAKGGTLIVCPMALLGQWKDELEAHSKPGSVSVFVHYGGDRSNDPRVIAEQDVV
LTTYGVLSATYKANNENSIFHNVDWYRVVLDEAHTIKSWKTLGAQAAFTLSARCRWCLTG
TPLQNNLEDLYSLLCFLHVEPWCNWAWWNKLIQRPYENGDQRALKLIKAILRPLMLRRTK
DTRDKDGRAILVLPPTDIQVIQCTQSEAERDFYDALFKRSKVQFDQFVAQGKVLHNYANI
LELLLRLRQCCNHPFLVMSRSDNQEFADLDKLARRFLETNPDSSTQKAPTPAYVEEVVEG
IRNGEHTECPICLESADDPVLTPCAHRMCRECLLSSWRTPASGLCPICRQMLKKHELFTC
PSANRFRVDVEKNWQVSSKVSKLMDCLEPIRKSGEKSIVFSQWTSFLDLLEIPLKRKQIG
YLRFDGKLSQKQRERVLKEFSETNEKTILLMSLRAGGVGLNLTAASNVFLMDPWWNPAVE
EQAIMRIHRIGQKKTVRVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARIEELK
MLFR
NT seq 3435 nt   +upstreamnt  +downstreamnt
atggaaatggaagcaaatgttgaagaaaatgataacaaaatcaagatgatacgttcaatc
atcggttctgaaattccagaaaatgaaattctcgaagccctctcacagaaaaacaacaat
ccagaagcatccattaatcatttgctcgattcttcgccgacattggcaatccacaagact
gttacgagcactggggtaagaatttcggctccgataaagcaagagaatggcgaagaatca
ttgggttgtgggtttaaagttaaagaagaacctgatgtgggtatcgatgaaaaatgggga
aaaaaggtttttgatgggtgcggagcaaaagggtctgttggtaaatgggattcaggctgt
gaaatggttaatgggttaaaagttaaagaagaatcaaatgtggttgatgaggaaaaaggg
caaaaagaggaagaaaagaaggttttcaatctaccagatttagaaaaagaattccatgag
tggcttaagttgcctgaaaacaacccgcaaatcgatattcagaaaccgaaagaagaaaag
aaacttgaaatggttaagttcaaagaagaacctgtactttttgttgaaccattatcagca
aggcctttgtcaaaacaagaatacaacagactgaatagtagtagtagtagtaatagggtt
attggggggattaaagaaaaaatgggaattgagaaaaatagtctcagtactgttatgatt
gaggatcgggatttcccagaagattctgattggttgttagttgggagaactgttgttact
ggtctttctactaccaaggggagaaaactggagaataatgagattgttcatttttcattt
cctcagtctggaagtagtaagcacagttcacagtggggtgggtcaagagctgctattgct
gctgcatcatccattgttaggttctcgactaaacgatcgggggagattgggcgtcttcca
atggaatgggcaaaatgccttattccacttgtaagttcttcaaaggtaaaggttcttggt
cgatgtgttgctgcgcctgtaaatctgtccctaatgcaggagcttatgttgtatgtaagt
ttctacattcaccactcggtgtttacgagctgtgataaatcatcatggaggctggattct
ccctcacaaattgatactacaacatatccactacttactctgttcaaattactcaaagtc
aaaccctttcagaatgctgagttcaccccggatgagcttgattctcgtaaacgccagctc
aatttagattctgattcaaatgaagctgcttcagtgttatcaattgcaaaacgaagaaag
ggctgccaacagtattcagagccaaacaaggatgagcaagcaatctctgaagcttctatt
aacaaacttgtcggttctgtagacatgtatgacttgaaggagatggaggctcctgataca
cttatgtgcagcctaaggccttaccagaaggaggctctttactggatgtcagaatcagag
aaaggagctggtgtagatgaagcatcaaaaactcttcatccatgttgggcagcatatcgg
atatgtgaagagaggaaaatatatgtcaacattttctctggggaagcaactactgacttc
ccaactgcatcaaatgcagcacgtggagggatcttggcagatgcaatggggcttggaaaa
acggtgatgacaattgctctaatacttgcaaatctgggcaggagtagccttgatgatcag
gaaattgtctcggaagacacagatgaaactgaatgtgttacaaaaagaatcacttatact
gatacagaattctcaagaaaagcaaaaggtggcactctcattgtctgtcctatggcatta
ctaggccaatggaaggatgaacttgaagcacattcaaaacctggtagcgtttcagttttc
gttcattatggtggggacagaagtaatgatcctagagtgatagcagaacaagatgtagtc
ctgacaacttatggtgtcttgagtgcaacttataaggctaataatgagaatagcatattt
cataatgttgattggtaccgggtggttctggatgaggcacacaccataaaatcctggaag
actctcggtgcacaggctgcctttactttgtcagcacgttgtaggtggtgtcttactggt
actcctctgcagaataatttggaagacctttacagccttttatgtttcttgcatgtcgag
ccatggtgcaactgggcatggtggaacaagttaatacagagaccttatgaaaatggtgat
cagagagctctaaaattgatcaaggccattttgaggccactgatgttgaggagaacaaag
gataccagggacaaagatggaagagcgattcttgttctccctccaaccgacattcaagtc
attcagtgtacacaatcagaagctgaacgtgacttctatgatgcactcttcaagagatct
aaggttcaatttgatcagtttgtggcacaaggaaaagttcttcacaactatgctaatatt
cttgaattactacttcgattgagacagtgttgcaaccatcctttccttgtgatgagccga
agtgataatcaagagtttgcagatttagacaaactagcacgaaggttcttggaaacaaat
cctgattcatcaacacagaaagcacctacaccagcatatgtagaagaagttgttgaggga
attcgaaatggcgaacatacggagtgtcccatatgcctcgagtcagcagatgaccctgtg
ctaacaccatgtgcccacagaatgtgcagagaatgcctcctttcaagctggagaactcca
gcaagtggactttgcccaatttgtaggcaaatgctaaagaaacatgagctattcacatgt
ccttctgcaaatcgatttcgagttgatgttgagaagaactggcaagtatcttctaaggtt
tcaaagctgatggattgcttagaacctataagaaaatctggtgaaaaaagcattgttttt
agccaatggacttcatttcttgatcttttggaaatcccactcaagagaaagcaaattggt
tacttgaggtttgatgggaaattgtcacagaaacaacgagaaagggtcttgaaagagttc
agtgagactaatgaaaaaacaatattgttaatgtcactaagagctggaggtgttggcttg
aacttaacagcagcttctaatgtctttctcatggatccatggtggaatcctgcagttgag
gagcaagcaataatgagaattcatcgtattggtcaaaagaaaacagttcgtgttagaagg
ttcattgttaaggacacagtggaagaaagaatgcaacaagttcaagcaagaaagcaaagg
atgatagctggagccttgactgatgaagaagtgaggtctgctagaattgaagaactcaag
atgctttttagataa

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