Solanum dulcamara (climbing nightshade): 129896782
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Entry
129896782 CDS
T09577
Name
(RefSeq) sister chromatid cohesion protein SCC2
KO
K06672
cohesin loading factor subunit SCC2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdul03036
]
129896782
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
129896782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
PHD
PDS5
IFRD
Prok-RING_1
PHD_ash2p_like
PHD_2
Motif
Other DBs
NCBI-GeneID:
129896782
NCBI-ProteinID:
XP_055828723
LinkDB
All DBs
Position
7:complement(66185762..66206964)
Genome browser
AA seq
1781 aa
AA seq
DB search
MANSSGSSGVPQGISLSNTVHSEIAPSLPLPSLPVFCGALDQELRLFDERSESRSLNRSD
VLIHASKIADLLQNTDVSYLNLRADASPQSCVFVGHLDLHNEVLACNSEAFALINAGPIK
DTARSRKANSNPLESIPAVQLPRQGTVEIHNYQHDHVISDVTASSRKPKVKKKGRENTLL
SSGPDASECQDAVAAGFCEMLEDFCGRAEIFSDERDEREFLTMSAADLKVVLREITSIRA
KKALNLIPVDNLVRLLRVLDHQIHRAEGLSINDCEHMDTEVVSLIFSALESIHAALAIMA
YNGMPKQLYKEEIIERIVEFSRHQVMDVIFGSDPVYRALHKPPEIGIPEGEEDEEVDGDF
VSPNRKKRSTRSVKPRKSTSNKVSSAVSNILQKLDVILGFLKELCTIERLPDSCIIQLIK
TCFTTFVVENIQLLQMKSISLISGIFYAYTQHRASIMDEALQILLKLPSSKRMPRTYPLP
DEEQRQIQLITALLIQIVHSSSNLPDVLRESSDSPSLEVSIDASYPTKSFESVTEACCLF
WSRVLQRLTNTKNQEAAELKTMIENLVIDLLTTLNLPEYPASAPLLEVLCVLLLQNAGLK
SKDISVRSMAIDLLGTIAARLKQDAVRCREEKFWIVKELRSGDIIDRNLPKDACSACSDT
RIDKSLVQCHGCQRLFHVNCTGISGHEIPNRGFHCQMCFSKKQLLVLKSLCESQSKYPGQ
NNCTKSGKSSQVTEAITNLEIVQQLLLNYLHDAATVDDLHLFTRWFYLCLWYKDDPNSEQ
KFMYYVARLKSQAIVRDSGSLSSLMTRESAKKITLALGQNSSFSRGFDKILQVLLASLRE
NSPIIRAKALRAVSIIVEADPEVLGDKLVQTAVEGRFCDSAISAREAALELVGRHIASYP
DVGLKYFEKLAERIKDTGVSVRKRAIKIIRDMCTSNSNFSEFTTACVEIVSRVNDEESSV
QDLVCKTFYEFWFEEPSGSQHHYFGDGSSVPLEVAKKTEQIVQMLRRMPSLQLLVTVIKR
NLALDFFSQSAKAVGINPASLGSVRRRCELMCKCLLEKILQVTEMNTGEGEVLMLPYMRL
LHAFCVVDPTLCAPASDPSQFVITLQPYLKSQADNRVAAQLLESIIFVIDSVLPLLRKLP
QSVAEELEQDLKQMIVRHSFLTVVHACIKCLCSVSKVGGKGSTIVEHLIQLFFKRLDSLG
FTNKQNFQQVGRSLFCLGLLIRYSSSLLHASVSSNNLHVSSSLNLFKKYLQAEDFVIKVR
SLQALGYVFIARPECMLEKDVGRILEATLSYNTDTRLKMQSLQNMYEYLLDAESQMGTNN
ASENEVANTALGGPSVPVAAGAGDTNICGGIIQLYWAKILERCLDVNELVRQSSLKIVEV
VLRQGLVHPITCVPSLIALETDPQEVNSKLAHHLLMNMNEKYPSFFESRLGDGLQMSFMF
IQAMNKGDSQSLKPQSKAPGIMSGKSEPGLFTHARLGVSRIYKLIRGNRISRNKFMASVV
RKFDTPSWSDQVGPFLIYCTEILASLPFTSPDEPLYLIYSINRIIQVRAGTVEANMKGFL
QFLQAGCQKINGSGSILTEPNQPIRCETETMVANSKIEEGFEGDHVGGDYGSVDPYMPHL
ASSNPHGISNADLQMIQVECLAAGALQLLLRLKRHLKIVYDLNDARCQAYSPNDPLKPGE
GLSKQSLPFNVNEINIEHPKNYEDFVRRYQDFKNALKEDTVDYAIYTANIKRKRPPPRRS
RKSGRMMGGDDEDYEDDEDWGSGMKTSNSVRRSSSRLRQHF
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattcaagtggcagtagtggtgttcctcaaggtataagcttatcgaatacagtg
cactctgaaattgccccgtctttgccattgccgtcacttcctgtgttctgcggtgcactc
gatcaagaacttaggttgttcgacgaacggagtgaatctagatcgttgaatcggagtgac
gtactcattcacgctagcaaaattgctgatctgcttcagaataccgacgtttcttatttg
aaccttagagctgatgcaagtcctcaatcttgtgtctttgtggggcaccttgacctgcat
aatgaagtgcttgcatgtaactctgaagcctttgctctaataaatgcaggccccattaag
gacactgcacgaagtcgcaaggctaattcaaatcctcttgagagtatacctgctgtccaa
cttccacgacaaggcactgtagagatccacaattatcagcacgaccatgttattagtgat
gttactgcatcttctaggaaaccaaaagtcaagaagaaaggaagggagaacaccttacta
tcaagtggccctgatgcttctgaatgtcaagatgcagttgcagcaggtttttgtgagatg
ttggaagatttttgtggcagggcagaaatttttagtgatgagcgggacgaaagagaattt
ttaacaatgtctgcggcagatcttaaagttgttttgagggagatcacatctatccgagca
aagaaagcactgaatttgattccagttgataatctagtgagattactcagggtcttagac
caccagattcatcgagcagaaggtttatcaattaatgattgtgaacatatggatacagag
gttgtgtcattgattttctctgctttagagtccattcatgcagctttagctataatggct
tacaatgggatgcccaagcaattatataaagaagaaatcattgaaagaatcgtggagttc
tctcggcaccaagttatggatgttatctttggtagtgatccagtataccgtgcgctgcac
aaaccacccgagatagggattcctgaaggtgaagaagatgaagaggtcgatggggatttt
gtttcaccaaataggaagaagagatctactaggagtgtgaaaccaaggaagtctacatca
aacaaggtttcttctgctgttagtaatatacttcagaagcttgatgtgattcttggtttt
cttaaggagttgtgcactatagagcgcctaccagacagttgcattattcaacttattaag
acctgtttcacaacatttgtggttgagaacatccagcttttgcaaatgaaatcaataagc
ttaataagtgggatattttatgcatacacacagcatcgtgcttctataatggatgaggca
cttcagattcttttgaagttaccctcttctaagcgcatgcctagaacttatcctctacct
gacgaagagcagaggcaaatccagctcatcactgctcttttaattcaaatcgttcacagc
agttcaaaccttccggatgttctgagggaatcatctgacagtccttcactagaagtctca
attgatgccagttaccctaccaaatcctttgagtcagtcacagaagcttgctgtcttttc
tggagtcgtgttcttcaacgtttaacaaacacaaaaaatcaagaggcagctgagttgaag
acaatgattgagaatcttgtcattgatctgttaactactttgaatttgcctgaatatcct
gcctctgctcctcttctggaggttctttgtgttttactcctccaaaatgctgggttgaaa
tctaaagatatttctgttcgttcaatggccattgaccttcttggcacaattgctgcaagg
ctgaaacaagatgcagtccgttgtagggaggagaaattctggatagtaaaggagttgaga
agtggggacatcattgaccggaatcttcccaaggatgcatgttctgcttgttcggatacc
aggattgacaaatcacttgttcaatgccatggttgtcagagactatttcatgttaactgt
actggaatcagcggtcatgaaattccgaatcgcggctttcattgccagatgtgtttctcc
aagaagcaacttcttgtgctgaaatcactatgcgagtctcagtccaagtatcctgggcaa
aataactgtactaagtcaggaaaatcgtcacaagttactgaggcaatcacaaatttggag
attgttcagcagctactactgaattatcttcatgatgctgcaactgtggatgatttacat
ctatttactcgctggttctatctttgtctttggtacaaagatgaccctaattcagagcaa
aagtttatgtattatgttgcacgattaaagtcacaagcaatcgtgcgcgactctggttcc
ctttcttcacttatgacgagagagtcggcaaaaaagattactttagcattgggacagaat
agttctttctccagaggattcgacaagattctgcaagtgcttctggcaagtttgcgggag
aactctccaatcattcgtgcaaaggcattgcgagcagttagtatcattgttgaggctgat
ccagaggttttgggtgataagctcgtccaaacagcagtggaagggaggttttgtgactct
gctatatctgcccgagaagctgcgttggaacttgtaggcagacatattgcttcatatcct
gatgttggtctgaagtactttgagaagttggcggaaagaataaaggatactggagtaagt
gtgcgaaagcgtgctatcaaaatcatacgggacatgtgcacttcaaattctaacttctca
gagtttactactgcttgcgttgaaattgtttcccgagtaaatgatgaggaatccagtgta
caggacctggtctgcaagacattttatgagttttggtttgaagaaccttctggttcacaa
catcattatttcggagatggaagttctgttccacttgaggtggctaagaaaacagagcaa
attgttcagatgctgagaaggatgcccagtcttcaacttcttgtaactgtgatcaaacgc
aacttagcccttgatttcttttcacaatccgctaaagctgtcggtatcaaccccgcttcc
cttggttcagtccgtaggcgctgtgagttgatgtgcaagtgcttactggagaaaatactg
caggtgacagagatgaataccggagaaggagaggtgcttatgctaccatacatgaggctc
ttgcatgccttttgtgttgttgatcctactctatgtgcaccagcttctgatccttcccag
tttgtgatcacgctacaaccttatttgaagagtcaggctgataatcgagttgcggctcag
cttttggagagtataatctttgtgattgattctgttttgcctttactacggaagcttcct
caaagtgttgctgaagaacttgaacaagatctgaagcaaatgatcgttcggcattctttc
ttgacggttgtccatgcttgcatcaagtgcctctgctctgtaagtaaagttggtggaaaa
ggctcaactattgttgaacaccttatccagttattcttcaaacgccttgattccctaggt
ttcactaacaagcagaactttcagcaagtgggacggtctcttttctgcctgggtttgcta
atacgttacagtagctctttgttgcatgcatctgtttccagtaacaacttacatgtttct
agcagcctcaatctatttaagaaatatctacaggccgaggactttgttatcaaggtccgc
tcattgcaggcactgggctatgtttttattgctcgccctgaatgtatgctggaaaaggat
gtaggaagaattttggaggccacactttcttataatactgatacacgactcaagatgcaa
tcactgcaaaacatgtatgagtatcttctggatgccgaaagtcaaatgggaacaaataat
gcaagtgagaatgaagttgctaatacagcacttggtggccctagtgtgcctgttgctgca
ggggctggtgataccaacatttgtgggggaataattcagttgtattgggctaaaatctta
gaaagatgcctggatgtgaatgaactagtgcgtcagtcttctctgaagattgtggaggtt
gtattgcgtcaaggtcttgttcatcctattacttgtgttccctctttgatagctcttgaa
acagatcctcaggaggtgaactcaaagctggctcatcatttgttgatgaacatgaatgag
aagtatccatccttctttgagagccgtcttggtgatggtctacaaatgtcatttatgttc
atacaagccatgaataaaggtgattctcaaagtttaaaaccccagtccaaagctccaggt
atcatgtcaggaaagtcagagcctggcttatttacccatgcaaggctcggggtatctcga
atctacaagctcatccgtggaaatcgtatttcaaggaacaaatttatggcctcagttgtg
cgcaaatttgatacaccaagttggagtgatcaagtgggcccatttttgatatactgcact
gaaattcttgcttcgcttccattcacatcgcctgatgagcccctttatttgatctattca
ataaatcggattattcaagttagggctggcacagtggaggcaaatatgaagggattttta
caatttttacaagcaggctgtcaaaaaataaatggaagtgggagcattctaacagagcct
aatcaacctattaggtgcgagactgaaacaatggttgccaactcaaaaattgaggaaggc
tttgaaggtgatcatgttggtggagattatggatcagtggatccatatatgccccatctg
gcatcatcaaatccacatggcatatcaaatgctgatttgcagatgatccaggtggagtgt
ctggcagctggcgctttacagctgcttctgaggcttaagaggcacctcaaaattgtgtat
gatctaaatgatgcccgttgccaggcatattctccaaatgatcccctaaaacctggggaa
ggtctttcaaagcaaagtcttcctttcaatgtgaatgaaatcaacattgagcacccaaag
aattatgaagactttgtccggagatatcaggatttcaagaatgccttgaaggaagataca
gtggactatgcaatctacacggcgaacattaaaaggaaacgccctcctccaagacgaagc
aggaaatctggtcgaatgatgggtggtgatgatgaagactatgaagacgatgaagattgg
ggtagtggaatgaagactagtaatagtgtcagaagaagcagtagcaggttaaggcagcac
ttctga
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integrated database retrieval system
