Solanum dulcamara (climbing nightshade): 129896790
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Entry
129896790 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129896790 isoform X1
KO
K04485
DNA repair protein RadA/Sms
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129896790
DNA repair and recombination proteins [BR:
sdul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
129896790
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
ChlI
Zn_ribbon_LapB
AAA
AAA_22
AAA_16
NACHT
Lon_C
NTPase_1
AAA_24
AAA_19
DUF7125
Isochorismatase
nSTAND_NTPase5
nSTAND3
AAA_5
DAP3
Motif
Other DBs
NCBI-GeneID:
129896790
NCBI-ProteinID:
XP_055828733
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Position
7:1921204..1933723
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AA seq
593 aa
AA seq
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MQVTNMQALRALHFQKHLLNLPPTTSLSSLRFTVICNSRQFHSTRRQHFPNQPTALTDDA
VQGWTAPSAARENPSGDNLPQRESKASANYSNVLGSKGRVYQVIGNGNKKKGKGKSKTVW
VCSDCGYDDGQWWGICKQCNGVNTMKRFSEGVERLTSGFEVSENVTRSWLPHQSVRAMPT
KLTDVNKGINQSNWRIPLSGLFGAEVGRVLGGGLVPGCLVLVGGDPGVGKSTLLLQIAAI
VAEGCDMGGPAPVLYVSGEESVEQIGNRADRMRIGTDELFLYASTDVEDILEKTQTLSLR
ALVIDSIQTVYLRGVTGSAGGLSQVKECTEALLRFAKKTNIPVFLIGHVTKSGEIAGPRV
LEHIVDVVLYMEGEKYSSHRLLRSVKNRFGSTDELGVFEMSQSGLQAVSNPSEMFLSEQQ
SDSEFLAGLAVTVIMDGSRAFLIEIQALCVAGSSVSRQVNGVQAGRAEMIISVLIKQAGL
KLQENGVFLNVVSGVSLSETAGDLAVAAAICSSFLEFPLPVGIAFIGEIGLGGEIRMVPR
MDKRVNTVAKLGYKKCIMPKSAEASLSALDLGDTEIVACRNLKEMINVVFRKH
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaacaaacatgcaagcactgagagctctccatttccaaaaacacttgctcaat
ctccctccaacaacctctctttcatctctccgtttcactgttatatgcaactcgcgccag
ttccactccactcgccggcaacactttcctaatcagcccacagctctcacagacgacgcc
gtacaaggctggaccgctccttcagcagctcgagaaaaccctagtggtgataatcttccg
caaagggagtctaaagcgagtgcaaattactccaacgttttgggttcaaaaggtagggtt
tatcaggttatagggaatgggaacaagaagaagggaaaagggaagagtaaaacagtgtgg
gtgtgttctgattgtgggtatgatgacgggcagtggtgggggatatgtaagcagtgtaat
ggggttaatactatgaagcggttttctgaaggggtagagcgtctcacgagtgggtttgag
gtttcagagaatgtgacaaggtcgtggctgcctcatcagtctgttagagctatgccaacg
aaattgacggatgtgaataagggaattaatcaatcgaattggcgaatacctctgtctggc
ctttttggagctgaagtgggaagagtacttggtggtggtcttgtgccaggttgcttagtt
ttagttggcggtgatccaggtgttggtaagagcacgttactgttacagattgcagccata
gttgcagaggggtgtgatatggggggaccagcaccagttctctatgtgtctggtgaagag
agtgttgagcaaattgggaacagagctgatcggatgagaatcgggacggatgaactattt
ttatatgcaagtacagatgttgaggatattctggaaaagacccaaactctctcactgcga
gctttggtaattgattccatacagacagtttatctgagaggagtaactggaagtgcagga
ggtctatcgcaggtaaaagaatgcacagaagcattgctgcggtttgccaagaagaccaat
atccctgtgtttctgattggacatgtgactaaatctggagaaatagctggtcctcgcgtc
ttggagcacatagttgatgttgttctttatatggaaggagagaagtattcatctcatcgt
ttacttcgttcagtgaagaatcgatttggatccacagatgagcttggagtgtttgaaatg
tcgcaatcaggcttgcaggctgtttcaaacccaagtgaaatgtttctaagtgagcagcag
tcggattctgaatttctggctggattagctgttactgtaattatggatggatctcgagcc
tttcttattgaaattcaggcattgtgtgttgctggttcatctgtctcaagacaagtaaat
ggtgttcaagcaggcagagctgagatgataatttcagttcttataaagcaagctggtctc
aagctacaagagaatggcgtttttctcaatgttgtcagcggggttagcctgtcagagact
gctggtgatcttgcagtagcagcagcaatttgcagcagttttttggaattccctcttcct
gtgggcattgcattcattggggaaattggccttggcggtgaaattcgtatggtaccaaga
atggacaaaagggtaaatacagtagcgaaactgggatacaagaaatgtataatgcctaaa
tcagctgaagcatcattgtcagctttagatctcggagacactgagattgtagcctgcagg
aatttgaaagagatgataaacgttgtgttcagaaaacactga
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