| Entry |
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| Name |
(RefSeq) DNA mismatch repair protein MSH3 isoform X1
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| KO |
| K08736 | DNA mismatch repair protein MSH3 |
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| Organism |
sdul Solanum dulcamara (climbing nightshade)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sdul00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129896798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:sdul03400]
129896798
DNA repair and recombination proteins [BR:sdul03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129896798
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:19222162..19245342
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| AA seq |
1117 aa
MGKPKQQVISRFFAPKPKNEEDPSTSTTPCIPPPKIAATVSFSPAKRLRTSQLISPRNKL
SSSYDDHPTKPTKTPKLSTHVDSPPPSLPNPTLHQKFLDKLLEPSYHLLEPSKCFEIANP
KYTPLEQQVVELKANNPDVLLMIEVGYRYRFFGQDAENAARVLGIYAHMDHNFLTASVPT
FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNRLGPFGRGLSALYTKATLEAAEDVGG
GDEGFGSCNNYLVCVVEKGIDLEGCGDDVKLGVVGVEVSTGDVVYGEFNDNFMRAGLEAM
ILNLLPAELLVGRPISKQTEKLLLAYAGPASNVRVEDVSSDRFSDGGALAEVMSLYEGMQ
ETYLLDVEEKEEAEMKMHECNQIAIQGIMAMPDLAIQALGLIVRHLKQFGLERVLCLGAS
FRPFSSNMEMTLSANALQQLEVLMNNFDGSESGSLLHCMNQTLTLFGSRLLRHWVTHPLC
DRNMIGARLDAVSEIAESMKTHRTSHTSVLEMEDADVASSQPEIHHIIVSVLSTIGRSPD
IQRGLTRIFHRKATASEFIAVIQAILIAAKQLQQLCVIEDKSANLQRETLHSVLLRKLIS
IASSSTVINGAAKLLSALNKEAADRQDLHNLFIISEGKFPEVAEGTRRVELANEKLDSLI
VVHRKQVHIHKLEYTSVAGITHLIELPLNTKVPPDWVKVNSTKKAIRYHSPEVLVALDEL
ALANEQLTVICQAAWNNFLTGFGGYFAELQAVVQALASLDCLNSLAILSRNKNYVRPLFV
EDDEAVQIHIFSGRHPVLDAVLQDNFVPNDTDLHAEREYCQIVTGPNMGGKSCYIRQVAL
IALMAQVGSFVPARSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSEASDILKKCSSNSL
VILDELGRGTSTHDGVAIAYATLQYLLEHKKCMVLFVTHYPEIVSIKNEFPGSVGPYHVS
YLTSQRDVNGDFKSNEKMDHINSEDITYLYKLVPGVSERSFGFKVAQLAQLPVACIQRAI
VIAAKLEAAVCNDMEQQIRRSCSLNHRQDGCKNETTEDILESDSLSAGRVEGLDDISELY
RELFLNLNLAFLEEHGDERRLQFLMQARSLTAQLISR |
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| NT seq |
3354 nt +upstreamnt +downstreamnt
atggggaagccaaaacaacaagtaatttcccgcttctttgcaccaaaaccgaagaacgaa
gaagacccttcaacttcaacaaccccctgtattccacctcccaaaattgctgccaccgtc
agcttttcacctgcaaagcgtcttagaacttcccaactcatttctcctcggaacaagctg
tcttcttcctacgatgatcatcctacaaagcccaccaaaacccctaagctatcaacccac
gtagatagcccacccccttctcttcctaatcccaccctccaccagaagttcctggataaa
cttctagaaccatcttaccaccttttagaaccttcaaaatgttttgaaattgcgaatccc
aagtacacaccattagagcaacaagttgtggagcttaaggccaataacccagatgttcta
ttgatgattgaagttggttacaggtacagattttttggtcaggatgcagaaaatgctgct
agagttttgggtatttatgcacatatggatcacaatttcttgacagctagtgtacccacg
tttcggttgaatgttcatgtaaggaggctggtgagtgcagggtacaaagttggggttgtt
aaacaaacggaaactgctgcaattaaggctcatggctcgaatagattgggcccttttggt
cgtgggttgtcagcattgtacacgaaagctactctggaggctgctgaagatgtagggggt
ggagatgaggggtttgggtcatgtaataactatttggtttgtgttgtcgagaagggaatc
gaccttgagggttgtggggatgatgtgaaacttggggttgttggggttgaggtttcaact
ggggatgttgtttatggggagttcaatgataatttcatgcgggctgggttggaggctatg
attctgaacttgctgccagctgaattgcttgttggcaggcctatatctaagcagacagag
aagctgctactggcttatgctggacctgcatctaatgttcgggtggaggatgtatcatca
gaccggttcagtgacggtggtgctctggctgaagtgatgtctctctatgagggcatgcag
gaaacttatttgttagatgtcgaagaaaaggaagaggctgaaatgaaaatgcacgaatgc
aatcaaattgcaatccagggaattatggcaatgcctgatttggctatacaagcattgggc
ctaattgttaggcatctaaaacaatttggtttggaaagagttctgtgcttgggagcttca
tttcgtcccttctctagcaacatggagatgactctttcagccaatgcactgcagcaactt
gaggttttgatgaataactttgacggatcagagtccggctccttattgcattgtatgaat
cagacccttactttatttggttcaaggcttctcaggcattgggtgactcatcctttatgt
gatagaaacatgataggtgctcgtcttgatgcagtttcagagatagcagaatctatgaaa
actcatcgaacttctcatacttctgtcttagagatggaagatgctgatgtcgccagttcg
caaccagagatacatcatataattgtttcagttttgtccactataggaaggtcaccagat
atccagcgcgggcttacaagaatctttcacagaaaagctaccgcctctgagtttattgca
gtcattcaagctatcttgattgctgcgaaacaacttcagcagctttgcgttatagaggac
aaaagtgcgaatctgcaaagagagaccttgcattctgtcctgttgagaaagctgatatca
attgcctcatcttctactgttattaatggtgctgcaaagcttttgtctgctttaaacaag
gaagctgctgacagacaggatcttcacaacttatttatcatttctgagggaaagttccca
gaggttgctgaaggtacaaggagagttgagttggcaaatgagaagttagactcattgatt
gttgtgcatcgcaaacaggttcacatccacaaattggagtatacgagtgtagctggaatc
acacatttgatagagttgcctctaaacacaaaggtgcctccagattgggtcaaagtgaac
agtactaagaaagcaatacgttatcattcaccagaagtattagtggctttagatgagtta
gcattggcaaatgagcagctcactgtcatttgccaagctgcatggaataattttttgacg
ggttttggtggatactttgccgagttgcaagctgttgtgcaagccctggcttcattggat
tgtctaaattctcttgccattctttcgaggaataagaattatgtccgtccgctctttgtg
gaagatgatgaggctgttcagatacatattttctctggtcgtcatccggttttggacgct
gttttacaagataactttgtcccaaatgatacagatttgcatgcagaaagagagtactgt
cagattgtcactggaccaaatatgggggggaaaagttgctatattcgccaagttgctctt
attgctctcatggctcaggttggatcctttgtaccagcgcgttctgcaaaactacatgta
ctagatgggatatatactcgcatgggcgcatcagacagtattcagcaaggaaggagtaca
ttcttagaagaattaagtgaggcttctgatatactgaaaaaatgctcatccaactcattg
gttatacttgatgagcttgggagaggcaccagcacgcatgatggtgtagcaattgcatat
gccacacttcaatatctcctagagcacaaaaaatgcatggttctatttgttactcattac
cctgaaattgtcagtatcaagaatgagtttccaggctctgtgggaccataccatgtgtca
tatctgacatcccaaagagatgtgaatggggatttcaagtcaaatgagaagatggatcac
attaatagcgaggacatcacctacctatacaaacttgtgccaggtgtttctgagagaagt
tttggttttaaagttgctcagcttgcacaactgccggtcgcttgtattcagcgagccatt
gtaatagctgcaaaactggaagcagcagtctgtaacgacatggaacaacaaattcgaagg
agctgttctctaaaccataggcaagatggctgtaaaaatgaaaccacagaggatatctta
gaatcagattccttgtctgctggaagagttgaaggattagacgacatcagtgagctttac
agggagttgtttctgaacctaaacttagcatttcttgaagaacatggtgatgaaaggaga
ctccagtttctaatgcaggctagaagccttacagctcagttaataagcaggtaa |
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