Solanum dulcamara (climbing nightshade): 129896878
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Entry
129896878 CDS
T09577
Name
(RefSeq) coatomer subunit beta'-2-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129896878
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129896878
Membrane trafficking [BR:
sdul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
129896878
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129896878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
WD40_RFWD3
TPR_GEMI5
WD40_like
Beta-prop_WDR35_TULP_N
WD_LRWD1
MAGUK_N_PEST
Motif
Other DBs
NCBI-GeneID:
129896878
NCBI-ProteinID:
XP_055828836
LinkDB
All DBs
Position
7:complement(2586764..2597750)
Genome browser
AA seq
914 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKCVDLHPTEPWILASLYSGTVCIWNYQTQTMVKSFEATELPV
RSAKFIARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHTDYIRCVAVHPSLSYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLISGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAVGCMRSSRRVVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEVQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSRIKIFSKNFQ
EKKSIRPTFSAERIYGGTLLAMCSNEFICFYDWADCRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSAHLDSGRSVDEQGVEEAFELLYEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVIGYTLLLSLIEYKTLVM
RDDWDRANEVLPSIPKEHHNSVAHFLESRGMVEEALEVATEPDYRFDLAIQLGKLDIAKD
IAVVAQSESKWKQLGELAMSAGMLEMAEECLKYANDLSGLLLLYSSLGDAEGITELATLA
KEQGKNNVTFLCMFLLGKVEECIQLLVDSNRVPEAAFMARSYLPSKVSEIVAIWKNDLSK
VNQKAAEALADPEEYPNMFEHWQVACAVESRVAEERGDYPPATEYVNHADRSTNNLVEAF
SNMRMDEEPLENGDMDHEVAEQSGDEVQELGQAAQNEGQEEPVVVDADSTDGAVLVNGTE
AEEWGTNTEGKPSA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggttggagattaagaggaaacttgctcaaagatcagaaagggtaaagtgt
gtggatctacatccgacggagccatggatattggcaagtttgtattcggggactgtttgc
atctggaactaccagacccagacaatggttaaatctttcgaggcgactgaattaccagtt
aggtcagcaaagtttatagcacgcaagcaatgggttgttgccggtgctgatgatatgtac
atccgtgtatacaattacaatacaatggacaaggtcaaagtattcgaagcgcacactgat
tatattaggtgtgtggctgttcatccttctctatcatatgtgctgtcatcttctgatgac
atgcttataaagctatgggactgggagaaaggatggctatgcactcaaatttttgagggt
cattcccattatgtgatgcaagtcacttttaatccaaaagacaccaatacatttgccagt
gcatctcttgatcggactataaagatttggaacctcggctcgcctgacccaaacttcaca
ttggatgcacatctaaaaggggtcaattgtgtagactatttcactggtggtgacaaacct
tatttgatcagtggttctgatgaccacactgctaaggtctgggactatcagactaaaagt
tgtgtccagactcttgaaggccatacacacaatgtctccgccgtatgttttcatcctgag
cttcctattataattacggggtctgaagatggtacagttcgtatatggcatgcaaccact
tatagacttgagaacactttgaattacggtcttgaaagagtttgggcagttggttgcatg
agaagttcaagaagggttgtaataggttatgatgagggcactatcatggtaaaaattggc
cgagaagaacccgttgccagcatggataacagtggaaaaattatatgggctaagcacaat
gaagtgcaaactgtcaacatcaagagtgtgggggcggattacgaggttactgatggagaa
aggctgcctttggctgtcaaggaattgggaacttgtgacctctatccacaaagcttgaag
cataatccaaatggaaggtttgttgttgtttgtggagatggagagtatatcatatatact
gctctagcatggagaaataggtcatttggttcagctctggaatttgtttggtcttctgat
ggagaatatgctgtgagagaaagtacgtcaaggattaagatcttcagcaaaaattttcag
gaaaagaagagtatccgccctactttctcagctgagcgcatctatggaggtactctattg
gcgatgtgctcaaatgagttcatttgtttctatgattgggccgactgcaggttgatacgg
cgaattgatgttaatgtgaagaatctctactgggcggacagtggtgatctggtggcaatt
gcaagtgatacatccttctacatactcaagtataatcgtgatgtggtttctgcccattta
gatagtggaagatcagtagatgagcaaggtgttgaagaagcttttgaacttctttatgag
ataaatgaacgggtcagaaccggaatttgggttggtgattgcttcatttacaataattct
tcctggagacttaactactgtgttggtggtgaggtgaccacaatgtttcatttagaccgg
cctatgtacctgctcggatatctggctaaccagagtagggtttttttgattgacaaagag
ttcaatgtcattgggtatactttactgctcagcctgatcgagtacaagacacttgtgatg
cgcgatgactgggacagagcaaatgaggtgctgccatcgattcctaaggagcaccataat
agtgttgctcatttcctggagtcgcgaggtatggtagaagaagcattagaagttgcaaca
gagcctgactacagatttgatctagccatacagctgggaaaattagatattgcaaaggat
attgcagtggtagctcaaagtgagtccaaatggaagcagttgggtgaactagctatgtct
gccggaatgctggagatggcagaggaatgtctgaaatatgccaatgacttgagtggtctg
ttgctactctattcttcactaggagatgctgaaggaataactgaactagcaactcttgcc
aaagagcaggggaaaaacaatgtcacattcctttgcatgttccttttgggtaaagtggag
gaatgcattcagctattggttgatagcaatcgggtacctgaggctgcttttatggctaga
tcttatctgccaagtaaggtttctgaaatagttgcaatttggaagaacgacctcagtaag
gttaaccagaaagcagcagaagctttggctgatcctgaagaatatcctaatatgtttgag
cactggcaagttgcatgtgctgttgaatctagagttgcagaagaaaggggtgactaccca
ccagcaacagaatatgtaaatcatgctgatagatcaactaacaaccttgtagaagctttc
agcaacatgagaatggatgaagaaccacttgaaaatggagatatggaccacgaggttgca
gaacagagtggtgatgaggtgcaagaactggggcaagctgcacaaaatgagggacaagaa
gagcctgtggttgtggatgctgactctactgacggtgcagtactcgttaatggaactgag
gcagaagagtggggtacgaatactgaaggaaaaccgtcagcctaa
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