Solanum dulcamara (climbing nightshade): 129896927
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Entry
129896927 CDS
T09577
Name
(RefSeq) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129896927
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdul01007
]
129896927
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129896927
Enzymes [BR:
sdul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
129896927
Amino acid related enzymes [BR:
sdul01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129896927
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129896927
Prokaryotic type
129896927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
ADPrib_exo_Tox
Motif
Other DBs
NCBI-GeneID:
129896927
NCBI-ProteinID:
XP_055828893
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All DBs
Position
7:complement(13848968..13862919)
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AA seq
1004 aa
AA seq
DB search
MRVSIDGSIWRCIAALPYSRAAAALQFPSFPSSTAPARRRLSRSFSVSTPMGSQPEALDW
PAKQIRETFISFFEGKDHKEVQSSPVVPHNDPTLLFVNAGMNQFKPIFLGIVDPNSPLSK
LKRACDTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTQV
YRLPSERIYATYFGGDEKSGLPADNEARDLWLKFLPPSRVLPFDCKDNFWEMGDTGPCGP
STEIHFDRIGNRDAASFVNNDDPTVIEIWNLVFIQFNREADGSLKPLPAKHVDTGLGFER
LTSILQNKMSNYDTDLFLPIFDAIQKATGARPYSGKVGADDVDKIDIAYRVVADHIRTLS
FAIADGSCPGNEGREYVLRRILRRAVRYGTEVLKAQQGFFSSLVKVVVEVMGDVFPELKQ
REIRIRDIIADEETSFGRTLLHGIEKFKKASQEVQGKQFSGQEAFVLWDTYGFPLDLTQL
MAEERGLVVDVDGFNVAMDAARERSRNAQSKNAGDAIAMDADATAALHKKGVAATNDIFK
FTWFQDHESEIKAIYTGSEFLETAAAGDEVGIILESTSFYAEQGGQIYDTGSLESPSGSF
QVCNVQIYGGFILHIGSFSGQAHKFSVGDKVICKVDYNRRTLIAPNHTCTHMLNFALKEV
LGDHVDQKGSIVLPEKLRFDFSHGKPVKPEELRKIESIVNEQIKSELDVYSKEAKLSDAK
SIKGLRAVFGEVYPDPVRIVSIGQKVEDLLANPENEEWSSYSAELCGGTHISNTREAKAF
ALMSEEGIAKGIRRVTAVTTYRAFEATDLASSLEQKVNEAFQTDDSFLEEKVTSLNATVE
RAQIPTVMKTDLKAKLSVLQNQVIKAKKKIAAENIQKAVKAASEMAEAAASGGKAYCILQ
IGVGLDTAAVREAVVKVMEQKGMAVLVFSKDEAANKVLVCAGVPEKGDKCQQLNVKEWLN
AALKPLGGKGGGGKGGLAQGQATDISKVDEAMDIAASFAAMKLN
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgagggtttctattgacggctcgatttggcgttgtattgccgctttaccctactctaga
gctgctgctgcacttcaatttccatcattcccttcttccaccgcgccggctaggagacgg
ctgtcacgtagcttttctgtttcaacgccgatgggttctcagccggaagcattggattgg
ccggccaaacagatacgggagactttcatcagcttcttcgaagggaaagatcacaaagaa
gttcaatccagtcctgtagttcctcataatgaccctactctcctattcgtcaatgctggt
atgaatcagtttaagcctattttcttgggtattgtagaccctaatagtccattgagcaaa
cttaagcgtgcctgcgatacacagaagtgtattcgtgctggtggcaaacacaatgatctt
gatgatgttggtaaggacacttaccaccacacgttctttgagatgcttggtaattggtca
tttggggattatttcaagaaagaggcaattggatgggcatgggaactccttacccaggta
tatagactgccaagtgaacggatttacgccacttatttcgggggtgatgaaaaatctggc
cttccagcggataatgaagctagagacctatggcttaagttccttccccctagcagggtg
cttcctttcgactgcaaagacaacttttgggagatgggtgataccggaccttgtggaccc
tccaccgaaatacactttgatagaattgggaatcgtgatgctgcatcatttgttaataat
gatgatcccactgtgattgagatatggaaccttgtctttattcagtttaatagggaagct
gatggttctttgaaaccccttcctgctaagcatgttgatactggactgggttttgaaaga
ctaacctctatcctccagaacaagatgagcaattatgatactgacctgttcttacccata
tttgatgctatacaaaaggcaactggagctcgtccatactctggcaaagttggagctgat
gatgtggacaaaattgatatagcctatagagttgttgctgaccacattcgaactctgtct
tttgccattgctgatggttcttgcccagggaatgaaggccgtgaatatgtcctcagacgc
attcttcgtcgagcagtgcgctatggtacagaggttctgaaagcacaacaagggtttttc
agtagccttgtgaaggtggtggtagaagttatgggcgatgtcttcccagagctgaagcaa
cgtgagatacgtataagagatatcattgctgatgaagaaactagctttggaaggacattg
cttcatggaattgagaaatttaagaaggcttctcaagaggttcaagggaagcaatttagt
ggtcaggaggcatttgtcttgtgggacacttacggatttccattagatttgacccagtta
atggcagaggaacgaggtttggtggttgatgttgatggttttaatgttgctatggatgct
gccagggaaagatcaagaaatgctcagagcaagaatgctggtgatgctattgccatggat
gctgatgctactgctgcattgcacaagaaaggcgtcgctgcaacaaatgatattttcaag
ttcacttggtttcaggatcacgagagtgagataaaagctatctacactggaagtgagttc
ttggaaactgcagcagctggggatgaagttggtattattcttgagagcactagtttctat
gctgaacaaggtggtcagatatacgacactggttcactggaaagccccagtggctctttt
caagtttgtaatgttcaaatttatggaggattcattcttcatattggatctttcagtgga
caggcacacaagttctctgttggtgataaagtaatttgtaaggttgactataacaggcgt
acattgattgctcccaatcatacatgcactcatatgttgaattttgccttaaaggaagta
ctaggcgaccatgttgaccagaaaggttccattgttcttcctgaaaaattgagatttgac
ttctctcacgggaagccggtaaagccagaggagctaagaaaaattgaatccattgtcaat
gagcaaattaagtctgaattggatgtatactcaaaggaggcaaagctgtctgatgctaag
agtataaaaggtcttcgagctgtctttggcgaagtgtatcccgaccctgtgcggattgtg
tcaattggtcagaaggtggaggaccttcttgctaatccagaaaatgaagaatggtcatcg
tactctgctgagctctgtggtggaacacacatttctaatacaagagaggctaaggcattt
gctctgatgtctgaggagggaattgccaagggaatccgaagggtcactgctgtcacaaca
tatcgtgcttttgaggccacagatttggcatcctcactcgaacagaaagtaaatgaagca
ttccagacagatgatagctttctagaagagaaagtaacttctttgaatgctaccgtggag
agggcacaaattcccactgttatgaaaactgatctcaaggccaaactctctgttctccag
aatcaagttataaaggccaaaaagaagatagctgcagagaatatacaaaaagccgttaaa
gctgcctcagaaatggctgaagctgcagcttctggtggaaaagcatactgcatcttgcag
attggcgtgggtttggacactgctgcagtccgtgaagcagttgtcaaagtcatggagcag
aagggtatggcagttctggtatttagcaaagatgaagctgcaaacaaagtgttggtctgt
gctggtgtccctgagaaaggtgacaagtgccagcagttgaatgttaaagaatggttgaat
gcagctttgaagcccttgggaggtaagggtggaggaggaaaaggtggtctcgcccaaggc
caggcaactgatatatcaaaagttgacgaggcaatggatattgcagcatcatttgctgct
atgaaattaaattga
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