Solanum dulcamara (climbing nightshade): 129896928
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Entry
129896928 CDS
T09577
Name
(RefSeq) F-box protein At5g07670-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129896928
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129896928
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Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
LRR_At5g56370
F-box_5
Motif
Other DBs
NCBI-GeneID:
129896928
NCBI-ProteinID:
XP_055828894
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Position
7:complement(25117556..25120428)
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AA seq
500 aa
AA seq
DB search
MACSPEKPIFRSPLKGPPSPSWNDLLLKNKKALNHVLFTMHLQSRSNKQTSSSSPSPQLR
KSLDFTLSSLVSDLTSLLSDEILLSILSKLPDSQRNSNSLVSKRWLNLQGRLVRSIKLLD
WDFLVSGRLFIRFPNLIHVDLVNGSLISPGNSGIFCSHRFLSSHVDCTADAKDWFLKERL
LLPSDDIDNGLRILASGCPNLRRLLVVNASELGLLGVAEECPTLQVLELHRCNDQVLRGI
AACQNLQILRLIGNVDGFYKSSVTDIGLTILAQGCKRLVKLELSGCEGSYEGIKAIAQCC
QMLEELILRDHRMEGGWLSALSYCENLNTLRFMSCKSIDHCGWFDEDVGSCPTLERLHFE
KCQLRNKESLRTLFLLCQEVREVIFHNCWGLDNEMFSLSSGLRRVKSLCLESCSLLTTEG
LESALLSWKQIQSLKVISCGNIKDTEISPALSTLFSTLKDFQWRADTKSLLSAGLVGTGM
RKRGNKLFKKTCDWKSLPGA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgttcacctgagaaaccaattttcaggtcaccattgaaagggccaccatctccg
agctggaatgatttgttgctgaagaacaagaaagctctcaatcatgtccttttcactatg
catcttcaatcccgttcaaataagcaaacctcatcttcatccccttctccacaacttcgc
aaatccctagattttaccctttcgtcgcttgtctccgatctaacttctcttctttctgat
gaaatacttctttctattctctctaaactccctgattctcagagaaattccaattccctt
gtatccaagcgctggctaaacctccaaggtcgtctcgtccggtccattaagcttcttgat
tgggatttccttgtttcgggtcggttgtttattcggtttccgaatcttatccatgttgat
ttggtgaatgggtctctgatttcacctgggaattcgggtattttttgctctcaccggttt
ctttcttcccacgtggattgtactgctgacgctaaagattggtttctaaaggaaagattg
ttgttgccttccgatgatattgataacggtttgagaatcctagcaagtgggtgtcctaat
ttgcgtagattgttggtggtaaatgctagtgaattgggattgttgggtgtagctgaggaa
tgtccaactttgcaagtgttggagttgcacagatgtaatgatcaggttcttcgtgggatc
gcagcctgtcagaacttgcagatattgagattgattggaaatgttgatgggttttataaa
tcttcggttactgatattggattgactattttagctcagggatgtaagaggttggtgaag
ctggagctgagtggttgtgaagggagctatgaagggattaaagcaatagcacaatgttgt
caaatgcttgaagagttgattcttcgtgatcataggatggagggtggttggttgtccgct
ctttcctattgcgaaaatttgaacaccttgaggtttatgtcttgtaagagtattgatcat
tgtggatggtttgatgaagatgtaggatcttgcccaacacttgaaagattacattttgag
aaatgccaattaagaaataaggagagtttgagaacgctgtttctactatgtcaagaagtt
agagaggttattttccacaactgttggggactggataatgaaatgttcagtctttccagt
ggtctaaggagagtgaagtctctttgcctagaaagctgttcactgctgacaactgaaggc
ctcgaatctgcactcctttcgtggaagcagatccagagcctcaaggtgatttcatgtggc
aatataaaggatactgaaatcagtccagcactttctaccttgttctccacactcaaagat
tttcagtggagagcagacacaaaatctcttctctcagctggtcttgtgggaactggcatg
cgaaaaagaggcaataaacttttcaagaagacgtgcgactggaagtcacttcctggtgca
tag
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