Solanum dulcamara (climbing nightshade): 129896941
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Entry
129896941 CDS
T09577
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00900
Terpenoid backbone biosynthesis
sdul01100
Metabolic pathways
sdul01110
Biosynthesis of secondary metabolites
Module
sdul_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
129896941
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sdul01006
]
129896941
Enzymes [BR:
sdul01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
129896941
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
129896941
2.5.1.29 geranylgeranyl diphosphate synthase
129896941
Prenyltransferases [BR:
sdul01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
129896941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
EcsC
Motif
Other DBs
NCBI-GeneID:
129896941
NCBI-ProteinID:
XP_055828916
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All DBs
Position
1:complement(2246586..2247819)
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AA seq
365 aa
AA seq
DB search
MAFLATISGHEKLYLSNTLNNNFTFSRKSQPSQSYNFLHKKIQASNVANSFQTFQVKEQE
VSSKTEKFILPKFEFQEYMKMKAIKVNKALNDAIPMQEPIKVHEAMRYSLLAGGKRVRPI
LCMASCEVVGGDESLAIPAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVFGENTA
VLAGDALLSLAFQHVATKTQNVKPHRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSL
SELEYIHHHKTGKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSS
NELGKTAGKDLMTDKATYPRLMGLEKARRYAGELVAKAMNELSYFDSAKVAPLYHIASYI
ANRQN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttagctaccatttctggccatgaaaaactgtacctttctaataccctaaac
aataacttcactttcagtagaaagtcccaacctagtcaatcttacaatttccttcacaaa
aaaattcaggctagcaatgtcgcgaactcattccaaacttttcaagtcaaagaacaagaa
gtttcatccaagacagagaaattcatcttgcctaagtttgagtttcaagaatacatgaaa
atgaaggcaatcaaggtaaacaaagcactaaatgatgcaataccaatgcaagagcctata
aaagttcatgaagccatgagatactcacttctagctggaggaaaacgtgtccggccgatc
ctctgcatggcttcttgtgaagttgtaggaggggatgaatccttagctatacctgcagct
tgcgcggttgagatgatccataccatgtcactcatccacgatgatcttccatgcatggac
gacgatgatctacgtcgtggcaagcccacaaaccataaggtttttggggaaaacactgca
gttctggcaggggatgcacttttgtctttggcctttcaacatgtggcaaccaagactcaa
aatgtaaaaccccacagagtggttcaagccattggggaattgggttcagctgttggctca
gaaggtctcgtggcagggcaaattgtggacttggcgagtgagggaaaacaagtgagccta
tctgaactggagtacattcaccaccacaagacagggaagcttttggaggctgctgtggtt
tgtggggcaataatggggggaggaaatgaggttgatgtggagagaatgaggagctatgct
aggtgcattggattgttgtttcaagtggtagatgacattcttgatgttactaagtcatca
aatgagttgggaaagacagctggtaaggacctaatgactgataaggctacatatcctagg
ttgatggggctagaaaaggctcggcgatatgccggtgagctggtggctaaggccatgaat
gagctaagctactttgattccgccaaggtggcacctctttatcatattgctagttatatt
gcaaatcgacagaattga
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