Solanum dulcamara (climbing nightshade): 129897274
Help
Entry
129897274 CDS
T09577
Name
(RefSeq) coatomer subunit beta'-2
KO
K17302
coatomer subunit beta'
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129897274
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129897274
Membrane trafficking [BR:
sdul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
129897274
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129897274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
TPR_GEMI5
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
WD40_like
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_DCAF12
TPR_8
Motif
Other DBs
NCBI-GeneID:
129897274
NCBI-ProteinID:
XP_055829002
LinkDB
All DBs
Position
1:complement(71569963..71587607)
Genome browser
AA seq
929 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQTQTMAKSFEVTELPV
RSAKFIPRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMRSSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKVIWAKHNEVQTVNIKSVGADYEVADGERLPLAVKELGSCDLYPQNLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSKIKIFSKSFQ
EKKSIRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSAHLDSGRSVDEQGVEEAFELLNEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANLSRVFLIDKEFNVMGYTLLLGLIEYKTLVM
RGDWDRANEVLPSIPKEHHNSVAHFLESRGMIEEALEVAADPDYRFELAIQLGKLEIAKE
IAVVAQSESKWKQLGDLAMSSGRLEMAEECLKHANDLSGLLLLYSSLGDAEGITVLASFA
KAHGKNNVAFLCMFMLGKVEECIQLLVDSNRIPEAAFMARSYLPSKVPEIVSIWRKDLSK
VNQKAAEALADPEEYPNLFEHWQIAHAVEARVAEERGVYPPAADYGSYADRPTTNLVEAF
SNLRMDEEPLENGELDHEVAELNGDDVKERGEDDLQQEGQEERGEDDLQQEGQEEAVVVD
ADSTDGAELVNGNEADEEYGTNTEGKPSA
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggttggagattaagagaaaacttgctcaaagatcggaaagggtaaagtca
gtggatctacatccttccgaaccatggatattggcaagtttgtattcagggactgtatgc
atctggaactaccagacccagacaatggcaaaatcttttgaagttactgaattaccagtt
aggtcagcgaagtttataccacgcaagcaatgggttgttgctggtgctgatgacatgttt
attcgtgtttacaattacaataccatggataaagtcaaagtgtttgaggcacatacagat
tatattaggtgtgtggctgtccatcctacactaccatatgtgctgtcatcatctgatgac
atgctaataaagctctgggattgggagaagggatggttatgcactcaaatatttgaaggt
cattcccattatgtgatgcaagtcacctttaatccgaaagacaccaatacttttgctagt
gcatctcttgatcggactataaagatttggaaccttggctctcctgatccaaatttcacg
ttggatgctcatcttaaaggggttaattgtgtagactatttcaccgggggtgataaaccc
tatctaattactggttctgatgatcacactgctaaggtgtgggactatcagacaaaaagt
tgtgttcagactcttgaaggccacacccacaatgtctctgctgtatgttttcatcccgag
cttccgattataattacaggttcagaagatggcactgttcgtatatggcacgcaaccact
tatagacttgagaacactttgaattatggtcttgaaagagtatgggcaattggttacatg
agaagttcaaggagggttgtaattggttatgatgagggaaccatcatggtaaaacttggt
cgagaagtacctgttgccagtatggataacagtggaaaagttatttgggctaagcacaat
gaagttcagactgttaacatcaagagtgtaggcgcagattatgaggtcgctgatggagaa
agactgccgttggctgtcaaggaattgggatcctgtgacctctacccacaaaacttgaag
cataatccaaatggaaggtttgtggttgtttgtggagatggagaatatatcatatatact
gctctggcttggagaaataggtcatttggctcagctctggaatttgtttggtcttcggat
ggagaatatgctgtgagggaaagtacttcaaagattaagatcttcagcaaaagttttcag
gagaagaagagcatccggcctactttctctgctgagcgcatctatgggggtactttatta
gcaatgtgctcaaatgatttcatttgtttctatgattgggctgaatgcaggttgatacgg
agaattgatgttaatgtcaaaaatctatactgggccgacagtggtgatctggtggcaatt
gcaagtgatacatcgttttacatacttaagtataatcgagatgtggtctctgcacattta
gatagcggaagatcagtagatgaacaaggtgttgaagaagcttttgaacttcttaatgag
atcaatgaacgggtcaggactgggatttgggttggggattgcttcatttacaataattct
tcctggagacttaactattgtgttggtggtgaggtgaccacaatgtttcaccttgatcgg
cccatgtacctactgggatatcttgctaatctgagcagggttttcctgattgacaaggag
tttaatgttatgggatatactctactccttggcctgattgagtacaagacacttgtgatg
cgtggtgactgggacagagcaaatgaggtcttaccatcaattcctaaggagcatcacaac
agcgttgctcatttcttggaatcacgcggaatgatagaggaagcattagaagttgctgca
gaccctgactacagatttgaactagctatacagctgggtaaattagagatcgcaaaggaa
attgcggtagtggcacagagtgagtccaaatggaagcagttgggtgacctagccatgtct
agtgggaggcttgagatggcagaggagtgtttgaagcatgcaaatgacttgagtggtttg
ttgctactctattcttctctaggagatgctgaaggaataactgtactagcttcttttgcc
aaagcgcacgggaaaaacaatgttgcattcctttgcatgttcatgttgggtaaagtggag
gagtgcattcagctgttggttgacagcaatcggatacctgaggctgcatttatggcaaga
tcttatctgcctagtaaggttcctgaaatagtttcaatttggagaaaggacctcagtaag
gttaaccagaaagcagcagaagctttggccgaccccgaagaatatcctaacctgtttgag
cactggcaaattgcacatgctgttgaagctagagttgcggaggaaaggggtgtctatcca
ccagcggcagattatggaagttatgctgatagaccaactaccaaccttgtagaagctttc
agcaacttgagaatggatgaagaaccacttgaaaacggagagttggatcatgaggttgca
gaactgaatggtgatgacgtgaaagaacggggtgaagatgaccttcaacaagagggccaa
gaagaacggggtgaagatgatcttcaacaagagggccaagaagaggctgttgtggtggat
gccgactctactgatggtgcagaactcgttaatggaaatgaggctgatgaagagtatggt
acgaatactgaaggaaaaccgtcagcctaa
DBGET
integrated database retrieval system
