Solanum dulcamara (climbing nightshade): 129898577
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Entry
129898577 CDS
T09577
Name
(RefSeq) trafficking protein particle complex II-specific subunit 120 homolog isoform X1
KO
K20306
trafficking protein particle complex subunit 9
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129898577
Membrane trafficking [BR:
sdul04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
129898577
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
129898577
NCBI-ProteinID:
XP_055829141
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Position
8:65922542..65936478
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AA seq
1188 aa
AA seq
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MEPDVSIETSCMIRVAVLPIGSIAIPLFRDYTSMLVRHYTVSLSSISSFYTEHQKSPFAH
QPWDSGSLRFKYMVGGSPASPWEDFQSNRKIFAVIGICHCPSSPDLHSVMDQFVTACKSY
SSSVVQRCFAFCPGDSQLEDESFKGSNLILFPPADRQTQEFHLQTMMQDIAASLLMKFEK
SVLQAESGGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYS
TSLELARLTGDFFWYAGAMEGSVCALLIDQMGQRDQVLDDEVKYRYNSVILHYRKSFIQD
NAQRVSPLSFELEATLKLARYLCRYSWKELAKEVVDLLTTAADGAKSLIDASDRLILYIE
IARLFGTLGYHRKAAFFSRQVAQLYLQQENRLAAISSMQVLAMTTQAYRVQSRASTDHTL
YQESGQNHADGGKAHHNWIVSLFESQWSSIQMVVLREILLSAVRGGDPLTAWSAAARLLR
SYYPLITPAGQNGLASALANASERLPSGIRCADPALPFIRLHSFPLHSSQQDIVKRNHGR
DDWWAGSAPSGPFIYTPFSKGEPSQSSKQELIWVVGEAVQVFVELANPCGFDLKVDSIYL
SVNSGNFDAFPISVSLPPNSSKVIALSGIPTEVGSLKIPGCIVHCFGVITEHYFKDVDNL
LVGAAQGLVLSDPFRCCGSPKLKNVVVPNISVVPPLPLLISRVVGSDGAIILYEGEIREV
QISVANAGTVPIEQAHISLSGKNQDSIQSIVYETLKSSLPLKPGAEVRIPVTLKAWQLGF
LDPDAAPSKNISGSTGRQVKDGCSPVLLIHYAGPLAYAGDASTNGSIPPGRRLVVPLNIC
VSQGLYLMKARLLSMEIPAHVGEDHSKVQVETSSAEGSPRTDRFMKIDPYRGSWGLRFLE
LELSNPTDVVFEIGVSVNMEDSNNEENPEYDYPKTRIDRDYTARVLIPLEHFKLPVLDGT
FLVKESQMNGTASRRSSFSEKSSKAELNASIKNLISKIKVRWQSGRNNSGELNIKDAIQA
ALQSSMMDVLLPDPLTFGFRCGNNTSQDFADLNFNEESDIQGTRKGSVRAHDTTPVEVLV
RNNTKEMIRVSLSITCRDIAGENCIEGDKATVLWAGVLNGVTMEVPPLKEYRHSFSLYFL
VPGEYTLLAAAVIDDANEMLRARARANSCDESIFCRGPPFHIRVNGTM
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgacgtgagcatcgaaacaagctgtatgatccgagtagcagttctgccaatt
ggatctattgcaatccctttattccgcgattacacttctatgctagttcgtcactacaca
gtatcattgtcttccatcagttcattctacacagaacatcaaaaatctcctttcgctcat
caaccttgggattccggtagcctccggttcaaatacatggtcggtggttcaccggctagt
ccttgggaagatttccaatccaatcggaaaatatttgccgttataggcatttgtcattgt
ccttcttcccctgatctacattctgtcatggatcagtttgtgaccgcttgtaagagttac
tcttcttcagttgttcagcgttgcttcgctttttgccccggtgactctcagctagaggat
gaaagcttcaaagggagcaacttaattttgtttcccccagctgatcgccaaacccaggaa
ttccacttgcaaactatgatgcaagatattgctgcctcgctgttgatgaaatttgagaaa
tcagttcttcaagcagagtccggtggaactattctcaagacgcctttagattcccaagcg
agtcttagctcagaggaggtcatcaaggctaaaaaacgaagattgggtcgtgcacaaaaa
actattggggattactgtctgttggcagggtcacctgttgatgctaatgcccattattca
acttcattggagcttgctagattgactggagacttcttttggtatgctggggcaatggaa
ggcagtgtttgtgcactgttgatagatcaaatgggtcagagggatcaagttctagatgat
gaggtcaaataccgttacaatagtgtcattttgcattacagaaagtcatttattcaagac
aatgctcaaagagtttctcctctaagtttcgagcttgaggctactctcaaattagcacga
tacctttgcaggtactcttggaaggagttggccaaggaagtggttgatttgttgactacg
gctgctgatggagcaaaatctttgattgatgctagtgacagattgatattatacattgaa
atagctcgcctctttgggactcttggttatcaccgaaaggctgcttttttctcaaggcag
gtggctcagctatacttgcaacaagagaatcgattggctgctatcagttcaatgcaagta
ctggcaatgaccacacaagcttatcgtgttcaaagtagagcctctactgaccatactcta
tatcaggaaagtggacaaaatcatgccgatggtggaaaagcgcatcacaattggatagta
tcactatttgaatctcaatggagtagcattcaaatggttgttctgagggaaatacttcta
tcagctgttcgtggtggagatcctcttactgcatggagtgcagcagcacgtcttcttagg
tcctattatcctcttattacacctgctgggcaaaatggtcttgcaagtgctcttgcaaac
gcatctgagagacttccctcaggaattcgctgtgctgatcctgcattgccttttataagg
ttgcattcttttccacttcattcctcccaacaggacatagtaaaacgtaaccatgggaga
gatgattggtgggcagggtctgctccttcaggaccctttatttatacacctttcagcaaa
ggggagccaagtcaaagcagtaagcaggagctgatttgggttgtgggtgaagcagtacaa
gtgtttgttgagttggcaaatccttgtggttttgatttgaaggtggatagtatatatcta
tctgttaattctgggaattttgatgcttttcccatcagtgttagtctgcctcctaattcc
tctaaagtgattgcattatctggaattcctactgaagtaggttcattaaaaatcccaggg
tgcattgttcattgttttggtgttatcactgaacattattttaaagacgtggataatctt
ctagtgggagcagctcaaggacttgtgctgtctgaccctttccgctgttgtgggtcacca
aagttgaaaaatgttgtggttccaaatatttcggtggtccccccattgccattgcttata
tcacgtgttgtgggtagtgatggtgctataattttatatgaaggagagattcgtgaagta
cagataagtgtggccaatgcaggtacagttccaatagagcaagcccacatctcattatct
gggaaaaatcaagactcaatccagtcaattgtttatgaaaccttgaagtcttcccttcct
ttgaagcccggtgctgaagtgagaatacctgtcactttaaaggcttggcagctcggattt
ttggatccggatgctgctcctagtaagaacatatctggaagcactggaaggcaagtcaag
gatggatgcagtcctgtgctgctgatccactatgcgggtccacttgcttatgctggagat
gcatcaacaaatggatctattcctcctggtaggcgcttggtcgttccccttaatatatgt
gtttctcagggattatatcttatgaaggctcgtttgttatcaatggagatccctgctcat
gtcggtgaggatcattcaaaagttcaagtggaaaccagttctgctgaaggatcccctcgt
actgataggttcatgaaaattgatccttacagaggcagttggggcctgcgtttcctcgag
cttgagttatccaatccaactgatgttgtctttgagattggtgtgtctgtcaatatggag
gattctaacaatgaggagaatcctgagtatgattatcctaaaactaggattgacagagat
tacactgccagggtgctaataccattagaacattttaagttacctgttcttgatggtact
ttcctggttaaggagtctcaaatgaatgggaccgccagtagaagatcaagcttctctgag
aaaagtagcaaagctgaacttaatgcttccatcaaaaatttaatttctaaaatcaaagtc
aggtggcaatctggcagaaacaattcaggagaactaaacataaaagacgcaatacaggct
gcgcttcaatcatccatgatggatgtattactacctgatccattgacttttgggtttagg
tgtggcaataatacttcacaagattttgctgaccttaatttcaatgaagaatctgatatt
cagggtacacgtaaaggttcagtaagagctcatgacacgacaccagtagaagtgctggta
cgcaataataccaaggaaatgattagagtcagtcttagcatcacatgcagagatatagct
ggggagaactgcatcgagggtgataaagcgacagtgctgtgggcaggtgttctgaatggt
gtcaccatggaggtacctccactgaaggaatatagacattcgttctccttgtatttcctg
gttccaggtgagtacacactattagctgctgctgtgattgatgatgctaatgaaatgctc
cgagcccgagcaagagctaattcatgtgatgagtccatattttgtcgtgggccaccgttc
catatccgagtgaatgggactatgtga
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