Solanum dulcamara (climbing nightshade): 129898629
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Entry
129898629 CDS
T09577
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129898629
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdul02000
]
129898629
04147 Exosome [BR:
sdul04147
]
129898629
04090 CD molecules [BR:
sdul04090
]
129898629
Enzymes [BR:
sdul01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
129898629
Transporters [BR:
sdul02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
129898629
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129898629
CD molecules [BR:
sdul04090
]
Proteins
129898629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_21
RsgA_GTPase
AAA_29
Zeta_toxin
AAA_30
AAA_5
DUF815
AAA_7
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
129898629
NCBI-ProteinID:
XP_055829224
LinkDB
All DBs
Position
8:complement(266003..273679)
Genome browser
AA seq
1288 aa
AA seq
DB search
MAEGNSLNGNSGLNEASSSSGGQNNTSQQDSDKTKQAENTNTVPFYKLFSFADSTDLVLM
ITGTIAAIGNGLSLPIMTILFGELTDSFGQNQNNKDVLRVVSRVSLKFVYLALGCGAAAF
LQVACWMISGERQASRIRSLYLKTILQQDIAFYDKETNTGEVVGRMSGDTVLIQDAMGEK
VGKFVQLISTFIGGFVIAFTKGWLLTLVMLSAIPPLVISGAAMSHVLSRMASSGQDAYAK
AATVVEQTIGSIRTVASFTGEKQAVANYNESLIKAYHSGANEGLATGLGLGSLFAIIYCS
YALAIWYGSKLILEKGYTGGQVINVIIAVLTSSMSLGQAAPCMSAFAAGQAAAFKMFETI
KRKPEIDAYDTNGKILNDIRGDIELNGVCFSYPARPDEQIFGGFSLFVPSGTTAALVGQS
GSGKSTVISLIERFYDPQSGQVLIDGINLKDFQLKWIRGKIGLVSQEPVLFTTSIKENIL
YGKHDATAEEIKAATELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDP
RILLLDEATSALDAESERVVQEALDRIMINRTTIIVAHRLSTVRNADMIAVIHRGKVVET
GTHCELLKDPEGAYSQLIRLQEVNKETEKSGLDERERLDKSMGSDRQSSQRMSLLRSISR
SSSGVGNSSRRSLSISFGLPTGLSVPETANTDTETGIQEVAEKPLKVPIRRLAYLNKPEI
PVLIIGTVAAIINGAILPIFGILFSSVIKTFYEPPHELRKDSRFWALMFVLLGGVTLIAF
PARTYLFSIAGCKLIRRIRSMCFEKVVHMEVGWFDESEHSTGIIGARLSADAATVRGLVG
DALAQMVQDSATAIVGLAIAFEASWQLALIVLAMIPLIGLNGYVQIKFMTGFSANAKVMY
EEASQVANDAVGGIRTVASFCAEEKVMEIYRRKCEGPLKAGIKQGLISGIGFGVSFALLF
CVYATSFYAGAHLVQDGKITFSDVFRVFFALTMAAIGISQSSSLAPDSSKAKSAAASVFA
ILDRKSKIDPSDDSGMTLDTVKGDIELKHVSFKYPTRPDIQILRDLCLTIHSGKTVALVG
ESGCGKSTVISLLQRFYDPDSGQILLDGIEIQKFQVKWFRQQMGLVSQEPVLFNDTIRAN
IAYGKEGNATEAEVLAAAELANAHKFISGLQQGYDTTVGERGTQLSGGQKQRVAIARAIL
KNPKILLLDEATSALDAESERIVQDALDRVVVNRTTVVVAHRLSTIKGADVIAVVKNGVI
VEKGKHDTLINIKDGFYSSLVALHTSAS
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagggaacagtttgaatggaaattcaggactcaatgaagcctcctcatcatca
ggagggcaaaacaatacaagccagcaggattcagacaagaccaaacaagcagagaacact
aatacagttcccttttacaagctcttctcctttgctgattccactgatctagttttgatg
atcactggaactattgcagctattggcaacggattgtccctgcccattatgacaattctt
tttggagaattgacagactccttcggacaaaaccaaaataacaaagatgtgcttcgcgta
gtctccagggtctcgctaaaatttgtctacttagctttgggatgtggggctgctgcattt
cttcaggtcgcttgttggatgatctccggtgaaagacaggcttctcgaataaggagtctc
tatctaaaaactattttgcaacaagatattgctttctatgataaggaaacaaatacggga
gaggtggttgggcggatgtctggtgacactgttcttatacaagacgcaatgggcgagaag
gtagggaaatttgtacagctgatatcaacgttcattgggggatttgtcattgcatttacc
aaaggctggcttctcacacttgtcatgttatccgccattcctccacttgtcatatctggt
gcagcgatgtcccacgttctatctaggatggcgtccagtggacaagatgcttacgccaag
gctgcaacggtggttgaacagacaattggatccattagaacggttgcatcatttacaggg
gagaagcaagctgtggccaactataacgagtccctaattaaagcttaccattcaggtgct
aatgaagggctggcaactggattaggtctgggctcactttttgctattatatactgcagc
tacgctttggctatttggtatggttcaaagctcatcttggaaaaaggatatactggtggt
caagttatcaatgtaattattgctgtgttaacttcttccatgtccctggggcaggcagct
ccctgtatgtctgcatttgctgcaggtcaagcagcagctttcaagatgtttgaaaccata
aagagaaagccggagattgatgcttatgataccaatggaaaaatattgaacgacatccgt
ggtgatattgaattgaatggtgtgtgcttcagttacccagccagacctgatgagcaaata
ttcggtggattttcactatttgtaccaagtggcacaactgcagctttggttgggcaaagt
ggaagtgggaagtcaacagtcataagtctgatagaaagattttatgatcctcaatctggt
caagttctgattgatggaattaatctcaaggacttccagcttaagtggatcaggggaaag
attggtcttgtgagccaagaacccgtacttttcacaacaagcattaaggaaaatattttg
tatggcaagcacgatgctactgctgaagagatcaaagctgcaactgagttagcaaatgcc
gcaaagttcatagataaactcccacagggtctagacaccatggttggagaacatggaact
caactttctggtgggcaaaagcaaagaattgccattgcaagagcaattttaaaagatcca
cggatattactattagatgaagcaacaagtgcattagatgcagaatctgagagagttgta
caagaagcattggatagaattatgatcaacagaacaaccatcatagttgcacatcgattg
agcacagtaaggaatgctgatatgattgcagtcattcatcggggaaaagttgttgaaaca
ggcacacattgcgaactactcaaggatcctgagggagcgtattctcagcttattcgctta
caagaagtgaacaaagaaacagaaaaatcaggcttagatgagagggaaagattagataag
tctatgggatctgatagacagtcaagtcaaagaatgtcactattacgatccatcagccgg
agttcatctggcgtaggaaatagcagccgccgttcactatccatctcatttggtttacct
actggacttagtgtacctgaaacagctaacacagacacagaaacgggtatccaggaagta
gctgaaaagccgttaaaggtccccatccgtcgcctagcctatcttaacaagcctgaaata
cctgtgcttatcattggaactgtggctgcaataattaatggtgctatacttccaattttc
ggaatcttattctctagcgtgatcaaaacattttatgagccaccgcatgaactaaggaag
gactcaaggttttgggctcttatgtttgttcttcttggaggtgtaactttaattgcattt
cctgcaaggacatatcttttcagtatagctggttgtaagttgataagaagaattagatca
atgtgctttgagaaggtggtccacatggaggtaggatggtttgatgaatctgagcactcc
actggaatcattggtgctaggctttctgctgatgcagccacagtgcgtggtttagtagga
gatgcacttgctcaaatggtccaagatagtgcaacagcaattgtaggcttagctattgct
tttgaagcgagttggcagttggcgcttatcgttcttgctatgatacctctaattggatta
aatggatatgtccaaatcaagttcatgacagggttcagtgcaaatgcaaaggtgatgtac
gaggaagcaagtcaagttgcgaatgatgctgttggaggtataagaactgttgcttcattt
tgtgcagaagagaaggtgatggaaatatacagaagaaagtgtgaaggcccattgaaggca
ggaatcaagcaaggtttgattagtgggattgggtttggtgtatcatttgctttgctgttt
tgtgtatatgcaaccagtttttatgcgggagctcatcttgttcaggatggcaaaatcact
ttttcagacgttttccgtgttttctttgctctgacgatggcagctataggaatttcccag
tcaagctcattggctccagattcaagcaaggccaagagtgctgctgcttccgtatttgct
attctagacaggaaatcaaaaatagatccaagtgatgattctggtatgacactggacact
gtgaagggagatattgagctgaagcacgtaagctttaagtatccaacaaggccagatatt
caaattttaagagacctttgtttgaccattcacagtgggaagacggttgctttggttggg
gagagcggatgtggaaagtcaaccgtaatatctttgctgcaaaggttttatgatcctgat
tcaggccagattttgttggatggaatagagattcagaagttccaggtaaaatggtttagg
cagcaaatggggcttgtaagccaagagccagtgttgttcaacgacacaatccgagccaat
attgcatatggaaaggaaggaaatgcaactgaagctgaagttttagcagcagccgaatta
gcaaacgcccacaagttcatcagtggtctgcaacagggttatgatacgacagtgggagag
cgaggaactcagctgtcaggtgggcaaaagcaacgagtggctatagcgagggccatattg
aaaaatccaaaaatcttactattagatgaggcaacgagtgcattggatgcagaatcagag
agaatagttcaagatgcacttgaccgggtggtggtaaatcgtacaactgtggtggttgca
catagattatccaccatcaaaggagcagatgtaattgctgtggtaaaaaatggagttatt
gtggagaaagggaaacacgatactcttatcaatatcaaagatggtttttattcctctttg
gttgccctccacaccagtgcttcctag
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integrated database retrieval system
