Solanum dulcamara (climbing nightshade): 129898653
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Entry
129898653 CDS
T09577
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129898653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129898653
03009 Ribosome biogenesis [BR:
sdul03009
]
129898653
04131 Membrane trafficking [BR:
sdul04131
]
129898653
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129898653
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129898653
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129898653
Membrane trafficking [BR:
sdul04131
]
SNARE
SNARE associated proteins
Others
129898653
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129898653
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129898653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_17
AAA_18
Parvo_NS1
ATPase_2
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
AAA_7
NB-ARC
AAA_24
TsaE
Vps4_C
DUF815
AAA_lid_PRS2_C
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
129898653
NCBI-ProteinID:
XP_055829253
LinkDB
All DBs
Position
8:75536460..75543383
Genome browser
AA seq
805 aa
AA seq
DB search
MTNQAESSDSKGAKKDFSTAILERKKSPNRLVVDEAVNDDNSVVALHPATMEKLQLFRGD
TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEEVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMSVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDIDLRALARYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRADN
PDSMDEDADDEISEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
ASGGAAASDPFTTSNAGADDDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccaggccgagtcatctgactcaaaaggtgcgaagaaggatttctctacggcg
attttggagaggaagaagtctcctaatcggcttgtcgttgacgaggcagtcaacgacgat
aactccgttgtcgcactacatcctgcaactatggagaaactacagctcttccgtggagat
acaattctcatcaagggaaagaaaaggaaggatacagttgtcattgctcttgccgacgaa
acatgcgatgagccaaaaattaggatgaacaaggttgtccgttcaaatttgagggtccgt
cttggagatgttgtgtctgtgcaccaatgtccagatgttaagtatgggaagcgtgtccac
atacttcctatagatgatacaatagaaggtctcactggggatttgtttgatgcattcttg
aaaccttactttttggaagcatatcgtcctttgaggaaaggggacaatttccttgttaga
ggagggatgagaagtgtggaattcaaagtcattgagactgacccaggggagtattgtgtt
gttgctccagatactgaaatcttttgtgagggggagcctgttaaaagggaggatgaggag
aggctggacgaagttggctatgatgacgttggtggtgtcagaaaacagatggctcagatt
cgtgaactggtggaattaccattgaggcatcctcaacttttcaaatccattggtgtgaaa
ccaccaaaggggattttgctctatggaccccctggttctgggaagaccctaatagccaga
gcggtggccaacgaaacaggtgcatttttcttttgcattaatggaccagaaatcatgtcc
aagttggctggagagagtgaaagcaatctcaggaaggcattcgaagaggctgagaaaaat
gctccatctattatatttattgatgaaattgattcaattgctcccaagcgagagaagaca
catggtgaagttgagagaaggattgtttcacagctcctgactctgatggatggactgaaa
tctcgtgctcatgtcatagttatgggagctaccaatcgtcctaacagcattgatcctgct
ctcagaaggtttggtaggtttgatagggaaattgacattggtgttcctgatgaaattgga
cggcttgaagttcttcgtattcataccaagaatatgaagcttgcagaagaagttgatttg
gaaagaatatcaaaagatacacatggttatgtcggtgcagatcttgctgctctttgcact
gaagctgcacttcagtgcattagggagaaaatggatgtcattgatctggaagatgattcc
attgatgctgaaatattgaattcaatgtctgtcacaaatgagcacttccaaactgctctc
ggaacaagcaatccatctgcattgcgtgaaacggttgttgaagtgcctaatgtctcatgg
gaagacattggaggtcttgaaaatgtcaaaagggaacttcaagagactgttcaataccct
gtggaacatccagagaagttcgagaaatttggtatgtcaccttcaaaaggtgttcttttc
tatggtcctccaggatgtgggaaaactcttcttgccaaggcaattgcaaatgagtgtcaa
gccaatttcattagtgtcaaaggacctgagctgctcaccatgtggtttggagagagtgag
gccaatgttcgtgaaatttttgacaaggctagacaatctgcaccctgtgtcctcttcttt
gatgagctcgactctattgccactcagaggggtagcagtagtggagatgctggtggagca
gctgatcgggttctgaaccaacttctgactgaaatggatggcatgaatgcgaagaaaact
gtttttattattggtgccacaaacaggcctgatataattgaccctgcacttcttcgacct
ggtcgactcgaccagttaatttatatcccactgccagacgaagactcacgccatcagatt
ttcaaggcatgtcttagaaaatctcccctatcaaaagatattgatttgagagctcttgcc
agatatactcagggatttagtggagctgatatcactgagatttgtcaacgggcctgtaaa
tatgccataagggagaacattgagaaagatatagaaaaggaaaagagacgagcagataat
cctgattctatggatgaggatgctgatgatgagatatcggagattaagcctgctcatttt
gaggagtccatgaagtatgcacgacgaagtgtgagtgatgccgatattcgtaaataccag
gcatttgctcagaccttacagcaatctcgaggttttggtactgaatttcggtttgctgag
gccagtggtggggctgctgcatctgatcccttcacaacttctaatgctggagctgatgat
gatgacttgtatagttaa
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