Solanum dulcamara (climbing nightshade): 129898722
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Entry
129898722 CDS
T09577
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129898722
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
129898722
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
129898722
NCBI-ProteinID:
XP_055829345
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Position
8:complement(19548469..19568821)
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AA seq
868 aa
AA seq
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MISTSATLAPPLSPPSSDSDSDSSSHRHHHSDLSSTIFKSYLELAGDHHNQKHDLIKIQA
FLTSSRSGALSCLICLERIRPSDPTWSCSSRCFAVFHLHCIQSWGVQSSNLAAVRAITRA
VAPNDSSLLWHCPKCRIEYSKSQIPKTYYCFCGKLPDPPHDPWVLPHSCGEICGRPLMYN
CGHHCLLLCHPGPCPACPKLVKSKCFCGAVEDVKRCGFKNFSCNGVCKNLLDCNTHRCNE
ICHEDDCPPCKAKGMFKCQCGKVEMKRECFDRVFRCENPCEKLLGCRRHKCEKGCHEGDC
GDCPLQGKRTCPCGKRVYEGIACDVVVSVCGATCGKMLSCGFHRCPERCHRGPCIETCRV
VVTKSCRCGSFKKQVPCYQDMTCERKCQKMRDCGKHACKRRCCDGDCPPCSEMCDRKLRC
RNHKCPAPCHRGSCAPCPVMVTISCLCGETHFEVPCGAEAEQKPPKCRKSCCVGRLCRHA
SNRKPHRCHYGACPPCRLLCDEEYPCGHKCGLRCHGPTPPPLPEFTLKPKKKRPNNQIEP
TPGSPCPPCPQLVWRSCLGNHLGAERMMVCSDRAIFSCNNLCGNLLACGNHYCTNVCHTL
VTSTSKLDTSRRAETCEKCTLPCQKEQRPTCPHPCPLPCHPGECPPCKALIKRSCHCSSM
VHVFECIYYNSLSAKEQLTVRSCGGPCHRKLPNCTHLCPETCHPGECPSPDQCSKKVNVR
CGCQTLKKELLCKDVQAAYQSSGTDPKDVSRNQYGLGLLPCNSDCRSKVKAAEAELQHRK
SKAPEKKEPETKDNVTKRRRRRVRVLEEKKTSTLQRIVAGLRRFLLFIITIIALITSVYL
GYKGLQWLSERMNEAEIRRQRRYTNIVV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgatctccacttctgccacccttgcaccacctctctcaccgccatcttctgactccgat
tcggactcctcctcccatcgccaccatcattccgacctctcttccaccatcttcaagtcc
taccttgaacttgctggtgatcaccacaaccaaaaacatgacctcatcaaaatccaagct
tttctcacttcttctcgttccggtgctctctcatgcctcatttgcctcgaaagaatccgt
ccctctgatcccacatggtcttgttcctctcgctgtttcgccgtctttcatctccactgc
attcaatcgtggggcgttcaatcctccaatttggctgccgtccgtgccatcacgcgcgct
gtcgctcccaatgacagctcccttctatggcactgccctaaatgccgcattgagtattct
aaatcgcagatccctaaaacatactattgtttctgtgggaaacttccagacccacctcat
gatccttgggttttacctcattcttgcggtgaaatttgtgggaggccattgatgtacaat
tgtggacaccattgtttactgttgtgccaccctggaccgtgtccggcttgtcctaaattg
gtgaaatccaagtgcttttgtggggctgtggaagatgtcaaacgatgtgggtttaagaat
ttctcttgcaacggtgtttgtaaaaacttgttggattgcaacactcataggtgcaatgaa
atttgccatgaggatgattgccctccttgtaaagctaaaggcatgtttaagtgtcagtgt
gggaaggttgagatgaaaagagagtgttttgatagggtctttaggtgtgaaaatccatgt
gagaagttacttgggtgtaggaggcataagtgtgagaaaggttgtcatgagggtgactgt
ggagattgtccacttcaagggaagaggacttgcccttgtgggaagagagtttatgaaggg
attgcgtgtgatgttgtggtttcagtatgtggagcaacatgtggtaaaatgctgagctgt
ggatttcatcggtgccctgaaaggtgccacagaggcccttgcattgaaacttgtagggtg
gtcgttaccaaatcatgtaggtgcgggagttttaagaaacaggttccttgctaccaagac
atgacatgtgaaaggaagtgtcagaaaatgcgcgactgtggaaaacatgcttgtaaacgc
cgctgctgtgacggggattgcccaccttgttctgagatgtgtgacaggaagctccgttgt
aggaaccacaagtgtccagctccatgccacagaggctcttgtgcaccctgtccggtaatg
gtcacaatttcatgtttgtgcggggagacacattttgaggttccttgtggtgctgaagct
gaacagaaacctccaaaatgtcgtaaatcatgttgtgtaggtcgcttatgcaggcatgct
tctaatcggaagccacataggtgtcactacggagcttgcccaccatgtcgtttactttgt
gatgaagaatatccttgtgggcacaagtgtggattgaggtgccatggccctacgccgcct
cctcttccagaattcactctgaaaccaaagaaaaagagaccaaacaatcaaattgaacct
actcctggttcaccatgccccccatgcccacaacttgtttggaggtcttgtttgggtaat
catttaggagcagaaagaatgatggtctgctcagacagggcaatattttcctgtaacaat
ctttgtggaaatcttcttgcttgtggaaatcactactgcactaatgtttgccataccttg
gttactagtacgtcaaaattagatactagtagaagagccgagacttgtgaaaagtgtact
cttccttgccaaaaggagcagagacctacttgtcctcatccgtgtcccttgccttgtcat
cctggagaatgtcccccttgcaaagcactgataaaacgttcatgtcactgcagttccatg
gttcatgtatttgagtgcatatactacaacagcttgtcagctaaagagcagttaactgtt
cggtcatgtggaggaccatgccatagaaaattacctaattgtacgcacctctgccctgaa
acatgtcatcctggtgaatgtccatctcctgatcaatgctccaagaaggttaatgttcgt
tgtggatgccaaactttgaaaaaagagttactatgtaaggatgtccaagcagcctatcaa
agtagtggtactgatcctaaagatgtatctagaaaccaatatggacttggcctcctccct
tgcaattcagattgcaggagcaaagtgaaggctgctgaggcagagttgcaacatcgtaaa
tcaaaagctcccgagaaaaaggaaccagaaacaaaagataatgtgacgaagcgaagacgg
agacgagtgcgggtgctcgaagaaaagaaaacttcgacactgcagagaattgtagctggc
ctcaggagatttcttctatttattatcactataatagctctaattacttcagtatatttg
ggttataaaggcctacaatggctttccgaacgaatgaatgaagctgaaatacgacgacaa
agaagatacacgaacatagttgtctga
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