Solanum dulcamara (climbing nightshade): 129898791
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Entry
129898791 CDS
T09577
Name
(RefSeq) LEC14B protein-like isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129898791
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129898791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_Vps41
Cytochrom_D1
Beta-prop_IFT140_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
129898791
NCBI-ProteinID:
XP_055829445
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Position
8:complement(964828..984828)
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AA seq
487 aa
AA seq
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MYFNFLHSDSIEDMGYSLSKLEVETGLFDGSSSNHGVAGSVHHERPANYLDHEISQLTKL
RSGPHENLSRILSGKREVPVSTFKMLAAREANISGRGRFSKADCCHVLSKYLPVSGPWIV
DQMETRAYVSQFSADGSLFVAAFQGSHIRIYNVERGWKVHKNILAKSLRWTVTDTSLSPD
QRHLVYATMSPIVHIVDVGSAATESVANITEIHDGLLLSADDGDFGIFSVKFSTEGREVV
AGSSDDAIYVYDLEANKLSLRISAHNSDVNSVCFADESGHLIYSGSDDNLCKVWDRRCFR
AKEKPVGVLMGHLEGVTFLDSRGDGRYFISNSKDQSIKLWDIRNMSSHAARNIWFRNYEW
DYRWMDYPPQARDVKHPYDQSIATYKGHSVLRTLIRCYFSPEYSTGQRYIYTGSHDGCIY
IYDLVSGVQVAKLQQHRSTIRDCSWHPTYPMLVSSSWDGDVVKWEFPGNGEAPLPPKRKQ
IRRRHFS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtattttaatttcttacattcagattccattgaagacatggggtattctctgagtaag
ttagaagtagagaccggactctttgatggttcaagttccaatcacggggttgctggcagt
gttcatcacgagagaccagcaaattatttggaccatgaaatttctcagcttactaaactt
agatctggaccccatgaaaatctcagtagaatcctatcagggaaaagggaagttcctgtg
tccacattcaagatgttagctgctcgagaagccaatatttccggtagaggaaggttctct
aaggcagattgttgtcatgttctaagtaaatatttgccggttagtggtccttggattgtg
gatcagatggaaacaagggcttatgtatcacaattttcagcagatggttccctttttgtt
gctgcctttcagggaagccatattagaatatacaatgtggaaagagggtggaaggttcac
aagaatattcttgcaaaaagtttgagatggacagttactgatacatctctttctccagat
caacgtcatctggtgtatgctaccatgtcacctatcgtacatattgtagatgtaggatct
gctgccactgaatctgtagccaacatcacagaaattcatgatggtttgcttttgtctgct
gacgatggagattttggaatcttctctgtgaaattttctactgaaggtcgggaagttgtt
gctggaagtagtgatgatgcaatctatgtttatgatcttgaagcaaacaaactctccctt
cgaatatccgcacacaattctgatgtcaattccgtatgttttgctgacgaaagtggccat
ctcatttattctggaagtgatgacaatctgtgtaaggtctgggatagacgttgctttagg
gccaaagaaaagccagtgggagtcctgatgggacacctagaaggcgttacgttccttgat
agtcggggggatggtcgttatttcatttctaatagtaaagatcagtccatcaagctctgg
gatatccgcaacatgtcttctcatgctgctcgcaatatatggttcaggaattatgagtgg
gactatagatggatggactaccctcctcaagctagagacgtgaagcacccttatgatcaa
tcaattgccacttataagggtcattccgtcttgcgtactctaattcgctgctacttctca
ccagaatatagcactgggcagagatacatttacacaggatcccatgatggttgcatttat
atctatgatttggtaagtggagtgcaagtcgcgaaattgcagcagcaccggtcgaccatt
agagattgtagctggcaccctacttatccaatgcttgttagctcttcttgggatggagat
gttgtcaaatgggaattccctggaaatggagaagcaccattacctccaaaaaggaagcag
atcagaagaaggcatttctcttag
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