Solanum dulcamara (climbing nightshade): 129898837
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Entry
129898837 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129898837 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129898837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129898837
03012 Translation factors [BR:
sdul03012
]
129898837
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129898837
Translation factors [BR:
sdul03012
]
Eukaryotic type
Release factors
129898837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
129898837
NCBI-ProteinID:
XP_055829504
LinkDB
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Position
8:70423854..70437799
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AA seq
535 aa
AA seq
DB search
MDIEEDIKALQLDSSAEDGAMANVEDGRPDEAIKHDKADGEDSVMEEERKTDDVEKPDMP
EDELRDEDHPELKPQHVESKGIAGKETSPSEDIQVEVEVNKKRHLNVVFIGHVDAGKSTI
GGQILLLSGQVDDRTIQKYEKEAKDKNRESWYMAYIMDTNEEERVKGITVEVGRAHFETE
TTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTL
GVTKLIIVVNKMDDPTVNWSKERYDEIESKMVPFLKSSGYNVKKDVQFLPISGLFGSNLK
TRLEKSVCPWWSGHCLFEVLDAVEVPPRDPNGPLRMPIIDKFKDMGTVVMGKIESGSIRE
GDNLLIMPNKAAVKVLAIFCDEDRVRHVGPGENVRVRLSGVEEDDLLSGFVLCSVAKPIP
AVTEFVAQLQILELLDNAIFTAGYKAVLHVHAVVEECEIVELMQQIDLKTKKPMKKKPLF
VKNGAIVLCRVQVNNMICVEKFSNFAQLGRFTLRTEGKTVAVGKITALPSVADSA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaagaggacatcaaggcgctgcagcttgattcatctgcagaagatggtgca
atggccaacgtggaagatggaagacccgatgaagctataaaacatgataaagctgatgga
gaggatagtgttatggaagaagagaggaagacagatgatgttgaaaaacctgatatgccg
gaagatgagttgagagatgaagatcatccagagttaaagccacagcatgtcgagtcaaag
ggcatcgctggaaaagaaacttcaccctcggaagatattcaggtggaggttgaagtcaat
aaaaagaggcacctgaatgtggtatttattggtcatgtagatgctggaaagtcaactatt
ggaggacaaatactattacttagtggtcaagttgatgaccgtactatacagaagtatgag
aaagaagcgaaggataaaaacagagagagctggtatatggcctatattatggatacaaat
gaagaggagagggtgaagggaataacagttgaagtaggaagagcacattttgaaacagag
acgacaagatttacaattcttgatgccccgggtcataagagctatgttcccaatatgatc
agtggagcatctcaagctgatattggtgtgctggttatatctgctagaaagggtgaattt
gaaactggatatgaaagaggtgggcagacacgtgaacatgttcaactggcaaagaccctg
ggggttacaaagcttattattgttgtaaataagatggacgatcctactgtcaactggtct
aaagaaaggtatgatgagattgagtcaaaaatggttccattcttgaaatcatcagggtac
aatgtcaagaaagatgttcaattccttccgatctccgggcttttcggttcaaatttgaaa
actagattggagaaaagtgtatgcccatggtggagtggtcactgcctttttgaagtcctt
gatgctgtcgaagttccacctcgagatcctaatggtccattgagaatgcctattattgac
aaatttaaagacatgggaactgttgttatgggtaaaattgagtctggaagcatacgtgag
ggtgataatctactgattatgccaaataaggctgctgtaaaagttcttgccatattctgt
gatgaagaccgagtaaggcacgttggtcccggggaaaatgtgcgtgttaggttatctgga
gttgaggaagatgaccttttgtcaggctttgtcttgtgcagtgttgcaaagccaatacct
gcagttaccgagtttgttgcacagttgcagatccttgagctgttggacaatgctattttt
actgctggatacaaagctgtattgcacgtccatgcggttgttgaggaatgcgagattgtt
gaactgatgcagcagattgatctaaaaacaaagaaacctatgaagaaaaaacctctattt
gtaaagaatggcgctattgttttatgccgtgttcaggtgaataatatgatatgtgtagag
aaattctccaactttgcacaacttggacgattcactcttcgcactgaagggaaaactgtt
gctgtggggaaaattactgcactgccttctgttgctgatagtgcataa
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