Solanum dulcamara (climbing nightshade): 129898851
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Entry
129898851 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129898851 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129898851
Membrane trafficking [BR:
sdul04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129898851
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
129898851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
ANAPC4_WD40
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_THOC3
Synaptobrevin
Beta-prop_WDR19_1st
Beta-prop_Aladin
ABC_tran_Xtn
DUF3381
DUF2937
Motif
Other DBs
NCBI-GeneID:
129898851
NCBI-ProteinID:
XP_055829527
LinkDB
All DBs
Position
8:18541959..18574483
Genome browser
AA seq
1077 aa
AA seq
DB search
MFAKFFEKLNPTPPNNAPEGSEKLTDLEATVSVHYGIPCTASILAFDPIQQLLAIGTLDG
RIKVIGGSNVEGLFFSPKPLPFKNLEFLQNQGFLVGISNGNDIQVWDLENRRISSSLQWE
SNITAFSVIYDTHYMFVGDEYGYLSVLKYEEGIMELLPYHIPPNLISEAAEISIPDQLAI
VGLLPQPSSNGNRVLIAYENGLIVLWDITEDRAALVREFKQLQSKDEIVVYASKNASEEK
FRASSDKQEGEKEIRSLCWLSSDGSILAVGYVDGDILLWNLSVPGKRSPEAEASSSYVKL
QLSAGDKRLPVIILRWSAKNTQNDCGGKLFVYGGDSIGSDEALTVLNLDWSSGIKALKCV
GRVDLGLDGSFADAIVVSNANETGIDDASSLFVLSNPGKLQFYNKASLSALKSNPEKKHA
AFAVEYPTVVPTLEPRITVAYLYSVDGKWNSSRTPSEEVVDAQLRPAHGVTKLEIEMPLT
SSIPRQLPPTKDDGIERVLVAGYLDGSVRLWNATFPVFTLLAVLESQYDVGLKGIQDTGP
RTAISALDFSSTALTLAIGHQCGQVHLYNLKGQSKTTSSNLTMDAEQDVQFCPGDTGFQF
SLIKSPVCILKFVAVGARLIAGFESSQVAMLDVSSSSVLFITDCLSSSSSGITSVAVKTL
GNVVEDTVEPCEDGTTNAYVKEVISVLTRDAEVVLLDSSTGKKISSQALHPKKMSTAISL
HILDSITSVSEESQKHSSMLDNAVQPEDLMQKYIDSQILLCCQEGLHLFSLSSIIQGDIN
PVHEVKLAKPCSWTSILKNDAENFGLVLVYQNGTVEIRSLLDLDVLGESSLMSILRWNSK
INMDKTISSPDKAMISLVNGSEFAVISLLAFGNDFRAPEGLPSLHKKSLATAADDVSTSQ
HQKKKQNTSIFGGIVKGFKGQQAADYVNARDSLVSHLENIFSRFPFSNPTNVTDDLGSLE
LKLDDIEIDETVHVTSSSLSSDDVKIEKETDRDRLLEGGSTDAKPTVRTREEIIAKYRNK
GDAASAAAQAKDKLLERQEKLERLSKNTQELQSGAENFADLAGELVKAMEKRKWWNL
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaaattttttgaaaagctcaatcccacgccaccgaataatgcacccgaagga
agtgagaaattgacagacctggaagcaacagtttctgttcactatggaattccatgtaca
gcatccattctggcatttgaccctattcaacaactcttggcaataggaacattggatgga
aggataaaagtgattggtggatctaatgtcgagggcctttttttctctccgaagccattg
ccattcaagaatttggagttcctgcaaaaccaaggatttttagtgggcatctcaaatgga
aatgatatccaggtttgggatctagagaacaggagaatatcttctagtttacaatgggag
tcaaacattactgcgttctccgttatctatgatactcattacatgttcgtgggagatgaa
tatggttatctctctgttctgaagtacgaggaaggaatcatggaactgttgccttatcac
atccctccgaaccttatatctgaagctgctgaaatttcaatacccgaccaactcgccatt
gttggtttacttccccaacctagttcaaatggaaatagagtcctgattgcttatgagaat
ggattaattgttctctgggacattacagaagatcgggctgctctagttagagagtttaaa
caactccaatcaaaggatgaaattgttgtttatgcttcaaaaaatgctagcgaagagaag
tttcgtgcttcatctgataaacaagaaggggaaaaagaaataaggtcactctgttggttg
tcatctgatgggtcaattttggctgttggttacgttgatggcgatatcttgttgtggaat
ttatcagttcctggcaagagaagtccagaggctgaagcttcgtctagttatgtcaagctc
cagctctcagcaggagacaaaagactccctgttattattctgcgttggtctgctaaaaat
acacagaatgattgtggggggaagctatttgtctacggtggtgattcaattggatcagac
gaagccttgacggttctgaatcttgattggtcctccgggataaaagcactgaaatgtgtt
ggacgagtagaccttggacttgatggatcttttgcagatgccattgttgtttcaaatgct
aatgaaacaggaattgatgatgcttcttccttgtttgtgttgtcaaatccagggaaactg
cagttttataacaaggccagcttgtctgctttaaaatctaacccagagaagaagcatgca
gcttttgctgttgagtatcctacagttgtacctacccttgaaccacgtataactgtggca
tacctatattcagtggatgggaaatggaattcctcaaggactccttcagaggaagttgtg
gacgcgcaactccgtccagctcatggtgtgactaaattggaaatcgaaatgcctctaact
agtagtattcccagacaacttcctcctactaaggatgatggaatagagagagtacttgtt
gctggctatctggatggatctgtccgtctgtggaatgcaacatttccagtctttacactt
ctagctgttctggaatctcagtatgatgtcgggttgaagggcattcaagacactggtcct
agaacagcaatatccgctttggacttctcctccacagctttaactcttgccattggccac
caatgtggccaggtgcatttgtataacctcaaagggcagtctaagacaactagctccaac
ttgactatggatgctgaacaggacgttcagttctgtccaggtgatactggatttcagttt
tccctgataaaatctccagtatgcatcctaaaatttgtagcagtgggtgccaggcttatt
gctggttttgaaagtagccaggttgccatgcttgatgttagttcatcatcagttttgttc
attacggattgtttatccagctcaagttccggaatcacttctgtggctgtgaaaacattg
ggtaatgttgttgaagacactgtggaaccctgtgaagatggaacaacaaatgcatatgtg
aaggaagttatttcagtattaaccagagatgcagaagtagtattgcttgatagctccact
ggaaaaaaaattagctcccaggcactacaccctaagaagatgtcaactgctatatctcta
catattttagatagcatcacatctgtttctgaagagtcacaaaaacattcttcaatgcta
gacaatgctgtgcagcctgaagatttgatgcagaagtatattgattcacaaattttactt
tgttgtcaggagggcttgcatttgttctccttaagttctataattcagggcgatatcaac
cctgtacatgaagtgaaacttgctaaaccttgttcttggacttccattcttaagaatgat
gctgaaaattttggactggttttagtatatcagaatggaacagttgaaataaggtccttg
ctggatcttgatgtcttgggagaatcctcattaatgtctatacttcgatggaattccaag
ataaacatggataagaccataagttctcctgataaagcgatgatttcactggtgaatggg
tctgaatttgctgtcatttcactgttggcctttggaaatgacttcagggctccggaaggt
ttaccttcactgcataagaaatctctcgcgactgctgcagatgatgtcagtacatcccag
catcaaaagaagaaacagaataccagtatatttggtggcatcgtgaaagggtttaaagga
cagcaggctgctgattacgttaatgctcgagattctcttgtttctcatctggaaaacata
ttctcgagatttcctttctcaaaccctacaaatgtaacagatgaccttggaagcctggaa
ctgaagttagatgatattgaaattgatgaaactgttcatgttacttcatcatctctcagc
agtgatgatgtcaaaatcgaaaaggaaaccgatagagacaggttgttggaaggtggttct
actgatgccaagccaacagtaagaactcgtgaagaaatcattgctaaatatagaaacaag
ggggatgctgcctctgctgcagcacaggcaaaagataagcttctcgagcgtcaggagaaa
ctcgagaggctcagtaaaaacactcaagagctacaaagtggtgcggagaactttgcggat
cttgcaggtgagcttgtcaaagccatggagaaacgtaagtggtggaacctgtaa
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