Solanum dulcamara (climbing nightshade): 129898868
Help
Entry
129898868 CDS
T09577
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129898868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129898868
03036 Chromosome and associated proteins [BR:
sdul03036
]
129898868
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
129898868
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
129898868
RSF complex
129898868
WICH complex
129898868
B-WICH complex
129898868
NORC complex
129898868
BRF complex
129898868
NuRF complex (fruit fly)
129898868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
DBINO
HDA2-3
LPD16
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
129898868
NCBI-ProteinID:
XP_055829552
LinkDB
All DBs
Position
8:62040675..62053151
Genome browser
AA seq
1063 aa
AA seq
DB search
MGKQSRDRSSSEESLSDSSEEEQVQGQVNEEEDEEELEAVARAAEDSDEEEDDDAPIDGA
DLEDEDNEEEVAVNEISKREKARLKEMQRIKKQKIQEMLDSQNAAIEADMNDKGQGRLKY
LLQQTELFAHFAKGEQSTAPKKTKGRGRHASKVTEEEEDEEYLKDEEDELSGNTRLMAQP
SCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEFRGITGPHM
VVAPKSTLGNWMNEIKRFCPVLRAVKFLGNPDERRYIREELLVAGKFDVCVTSFEMVIKE
KSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWALLNF
LLPEIFSSAETFDEWFQISGESDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILK
VGMSQMQKQYYKALLQKDLEVVNSGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTG
EHLVENAGKMVLLDKLLPKLKERGSRVLIFSQMTRLLDILEDYLLFRGHQYCRIDGNTGG
EDRDASIEAFNKPGSEKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHR
IGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFG
AEMVFSAKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDFDDEK
EENKVDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQSGPARPKEPRIPRMPQLHDFQ
FFNTQRLSELYEKEVRFLMQTHQKNQVKDTIEVEEPEDAGEPLTAEEQEEKEQLLEEGFS
MWSRRDFNTFIRACEKYGRNDLKSIAAEMEGKIEEEVERYAHVFKERYKELNDYDRIIKN
IERGEARISRRDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLG
YGNWDELKTAFRTSTLFKFDWFVKSRTTQELARRCDALIRLIERENQEYDERERQARKEK
KLAKNTTPSKRTLARQAAESPSGLKKRKQLSMDDYVSSGKRRK
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacagtcgagagacagatcatcttcggaggagtctctatcagatagttccgag
gaggaacaagtacaaggtcaggtcaatgaagaggaagacgaagaggagcttgaggctgtc
gccagggccgctgaggactctgacgaagaggaagacgatgatgctcctatcgatggagcg
gacctagaagatgaggataatgaggaagaggttgcagtcaatgaaatctcaaagcgtgaa
aaggccaggttgaaagagatgcagaggatcaagaagcagaaaatacaagaaatgttggat
tcacagaatgctgccattgaggctgacatgaatgacaaaggacaggggcgattgaagtat
ctcttgcagcaaactgagttatttgcgcattttgccaagggtgagcagtccaccgctcca
aagaagacaaaaggaaggggccgtcatgcatcaaaggtaactgaagaggaagaagatgaa
gagtatctcaaagatgaagaagatgaactttctgggaatacacgacttatggcacaaccc
tcctgtattcaagggaagatgagggattatcaacttgctggtttgaactggctgattcga
ctgtatgagaatggaataaatggaatacttgctgatgaaatgggtcttggtaagacgttg
caaaccatctccttgatgggctacctacatgaatttcgaggaataactggtcctcacatg
gttgttgctccaaaatccacgcttggcaattggatgaacgaaatcaaacgtttctgtcct
gttttacgtgctgttaagttccttggaaatcctgatgaaaggagatacatacgtgaggaa
ctacttgttgcagggaagtttgatgtgtgtgtcacaagctttgagatggttatcaaagag
aagtctgctttacgacgctttagttggcgttacatcataattgatgaggcacatagaatc
aagaatgaaaattctcttctttcaaaaacaatgaggctctacaacactaattatagatta
cttatcacggggacaccgcttcagaataatcttcatgaactctgggcactactgaacttt
ctgctgcctgagatctttagctcagctgagacttttgatgagtggttccagatttctggt
gagtctgaccagcaggaggtggtccaacagcttcataaggtcctgcgtccattccttctt
aggaggctgaagtctgatgtggagaaaggtctgcctcccaaaaaagaaacaattcttaag
gtcggtatgtcacagatgcagaagcagtactacaaggctctgctgcagaaagatcttgaa
gttgtcaattctggaggggagcgcaagcgtcttctcaatatagcaatgcagctacgaaaa
tgctgtaaccatccgtatcttttccaaggtgctgagccaggacctccatatacaacagga
gagcatcttgtagaaaatgctgggaaaatggttcttctagacaagttgcttcctaaatta
aaggaacgtggctcaagggttttaatattttcacagatgaccaggctattggacatcctt
gaagactacttgttgttccgaggtcaccagtattgccggattgatggaaatactggtggt
gaggatcgtgatgcttctattgaggcttttaacaaaccagggagtgaaaaatttgccttc
ttgttgtcaaccagagctggtggtcttggtatcaatcttgctacagcagatattgttatt
ctttatgatagtgactggaatccacaggttgatttgcaggctcaggaccgggcccataga
attggtcagaagaaggaagtccaagtattccgcttctgcactgagtataccattgaggaa
aaggtgattgaaagggcttacaaaaagcttgcacttgatgcattggttatccagcagggg
cggctagctgagcaaaaaactgttaacaaggatgagctgctgcaaatggtgcggtttggt
gctgaaatggttttcagtgctaaagatagcactattactgatgaggatatagatagaata
atagctaaaggagaagaggcaacagctgaacttgatgccaagatgaagaagtttacagaa
gatgctatcaagtttaagatggacgacactgctgaattgtatgactttgatgatgagaag
gaagaaaacaaggtggatttcaagaaaattgtcagcgacaattggatagaacctccaaaa
agagagagaaagcgcaattattcagagtctgaatacttcaagcaaaccatgcgccaaagt
ggccctgcaagacctaaagagcctcggattcctcggatgccgcagctgcacgactttcag
ttcttcaatacacagagactgagtgagttgtatgagaaggaagtgcgctttcttatgcag
acacaccagaagaatcaggttaaagatactatagaggtcgaagaacctgaagatgcagga
gagcctttaacggctgaagagcaggaagaaaaggagcaactgttggaagagggattttca
atgtggagtagaagagacttcaatacttttatcagggcttgtgagaagtatggtcgcaat
gacttaaaaagtattgctgcagaaatggaggggaaaatagaggaggaggttgaaagatat
gcacatgttttcaaagaaagatacaaagaactaaatgattatgataggattattaagaac
attgaaagaggagaggctagaatttcgcggagggatgagattatgaaagcaattggtaag
aagctggatcgatacaaaaatccatggttggaattgaagatccagtatggtcagaacaaa
ggaaagttgtataatgaggagtgcgatcgtttcatgatatgtatggttcataagcttggc
tatggaaattgggatgagctgaagactgcatttcgcacatccaccttgttcaaatttgat
tggtttgtgaagtctcgtaccactcaagaacttgccagaagatgtgatgcacttattcgg
ttgattgagagggaaaatcaagaatatgatgagagggagaggcaggcacgcaaagaaaag
aagcttgcgaagaacactaccccatcaaagcgcactttggcgagacaggcagctgaaagc
ccttctggtctgaagaaacggaagcaattgtcaatggatgactatgtcagctcaggaaag
aggagaaaatga
DBGET
integrated database retrieval system
