Solanum dulcamara (climbing nightshade): 129898917
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Entry
129898917 CDS
T09577
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129898917
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129898917
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129898917
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129898917
03041 Spliceosome [BR:
sdul03041
]
129898917
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
129898917
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
129898917
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129898917
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129898917
Spliceosome [BR:
sdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129898917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
129898917
NCBI-ProteinID:
XP_055829605
LinkDB
All DBs
Position
8:31539977..31553994
Genome browser
AA seq
304 aa
AA seq
DB search
MDPAAVDRIIERLLEVRLSKPGKLVQLSESEIKQLCVASRDIFVKQPNLLELEAPIKICG
DIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGRQSLETICLLLSYKIKYPENFFLLRG
NHECASINRIYGFYDECKRRFNVKLWKSFTDCFNCLPVAALIDEKILCMHGGLSPDLSSL
DQIRNLPRPTAIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKVSEFLSKHDLDL
VCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKN
KFMM
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgccgctgttgataggattattgagaggctattagaagtccgattatcgaag
cctggcaagttggtgcagctgtcagagtccgaaatcaagcaactatgtgttgcctctagg
gatatcttcgtcaaacagccaaatctccttgagcttgaagcacccatcaaaatttgcggt
gacattcatgggcagtacagtgatctgttgaggctttttgaatatggtggttttcctccg
aaggctaactacttatttttaggtgattatgtagatcgtgggaggcagagcttggaaaca
atatgcctcttgctttcctataagattaagtatcctgagaacttttttttgcttagagga
aaccatgaatgtgcttctataaataggatatacggattctatgatgagtgtaagcgccgg
ttcaatgtgaaactatggaagtcctttacagactgctttaattgtcttcctgtggcagca
cttatcgatgagaagatattatgcatgcatgggggtctctcccctgatctttctagtttg
gatcagattcggaacttaccacgtccaactgccatcccggacactggtttgctttgcgat
ttgctttggtcggatcctggtaaagatgtgaaggggtgggggatgaacgatagaggagtt
tcatacacctttggccctgataaagtttctgagtttttgtcaaagcatgacttggacctt
gtctgtcgtgcccatcaggttgtggaggatggttatgaattctttgctgagaggcagctt
gtcaccattttttcagcacccaactactgcggagagtttgacaatgccggtgctatgatg
agtgttgatgaaaacttgatgtgctctttccaaattcttaagccagcagagaagaaaaat
aagtttatgatgtga
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