Solanum dulcamara (climbing nightshade): 129898949
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Entry
129898949 CDS
T09577
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04120
Ubiquitin mediated proteolysis
sdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129898949
04120 Ubiquitin mediated proteolysis
129898949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129898949
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
129898949
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
FAS_N
Chromo_MIT1
HTH_34
Motif
Other DBs
NCBI-GeneID:
129898949
NCBI-ProteinID:
XP_055829638
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Position
8:complement(79197848..79204681)
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AA seq
740 aa
AA seq
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MTTSQMKTIELEEGWEFMQKGITKLKKILEGHPDSFSSEEYMMLYTTIYNMCTQKPPHDY
SQQLYEKYKEAFEEYINSTVLSSLREKHDEFMLRELVKRWANHKLMVRWLSRFFHYLDRY
FIARRSLPALNEVGLTCFRDLVYQELKSKARDAVIALIDQEREGEQIDRALLKNVLGIFV
EIGMGEMEFYENDFEDAMLKDTAAYYSRKASNWIVEDSCPDYMLKAEECLKKEKDRVSHY
LHSSSETKLLEKVQNELLVVYTNQLLEKEHSGCRALLRDDKVEDLSRMYRLFHRIPKGLE
PVANMFKQHVTAEGMVLVQQAEDSASNKAESSSGSQEQVFVRKVIELHDKYMAYVTDSFA
NNSLFHKALKEAFEVFCNKIVAGCSSAELLASYCDNILKKGGSEKLSDDAIEETLDKVVK
LLAYISDKDLFAEFYRKKLSRRLLFDKSANDDHERLILTKLKQQCGGQFTSKMEGMVTDL
TLAKENQSHFQEYLSNNSAANPGIDLTVTVLTTGFWPSYKSSDLSLPVEMVKCVEVFKEF
YQTKTKHRKLTWIYSLGTCNINGKFESKTIELIVGTYQAAALLLFNASDRLSYSDIKSQL
NLADDDLIRLLQSLSCAKYKILTKEPSNRTVSSTDHFEFNSKFTDRMRRIRIPLPPVDER
KKVVEDVDKDRRYAIDACIVRIMKSRKVLPHQQLVLECVEHLSRMFKPDFKAIKKRIEDL
ITRDYLERDKENPNLFKYLA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgacgactagtcagatgaagactatcgagctggaggaaggatgggagttcatgcagaag
ggaatcacaaaattaaagaaaatcttagaagggcatccagattcattcagctctgaagag
tacatgatgctctacacaactatctataacatgtgtacacagaagccccctcacgattac
tctcagcagctatatgagaaatataaggaagcctttgaagaatacatcaattctacagtt
ctctcttctttgagagagaagcacgatgagtttatgctgagggagctcgtgaaaagatgg
gcaaatcataaacttatggtcaggtggctttcacggttcttccattatcttgatcggtat
tttattgctcgaagatcactccctgcacttaatgaagttggtctgacgtgcttccgtgat
ttggtttatcaagagttgaaaagtaaagctagagatgcagttatagcactgattgatcaa
gaacgtgagggtgagcagattgatagagcattattgaagaatgtgctaggtatatttgtt
gaaattggaatgggggagatggagttctatgaaaatgactttgaagatgccatgctaaaa
gatacagcagcttattattctcgaaaagcatcaaactggattgtggaagattcttgtcca
gattatatgttgaaggcagaagagtgcttgaaaaaggagaaggatagagtttctcattat
ttacactcaagcagcgagacaaaacttctggagaaagtgcaaaatgagttattggttgta
tatactaatcaattgcttgagaaggagcattctggatgtcgagctttgcttagagatgac
aaggtagaggatttatctcgaatgtataggctattccacaggattcctaaaggtttggaa
ccagttgcaaatatgtttaagcagcatgtcactgctgaaggcatggtgttggtgcaacag
gccgaggactcagcaagtaacaaggctgagagttccagtggttcacaggagcaggtcttt
gttaggaaggttattgagctgcatgacaaatatatggcatatgtgaccgacagttttgca
aataactctctctttcacaaggctttgaaagaggcatttgaggtcttctgtaacaaaatt
gttgctggctgttctagtgcagagctccttgcctcttattgtgataatatccttaagaag
ggtgggagtgaaaaactcagtgatgatgctattgaggagacattagataaggtggtcaag
cttcttgcatatatcagtgacaaagacctttttgctgagttctacaggaagaagctttct
cggcgactgctttttgataaaagtgccaatgatgaccatgagaggcttatcttaacaaag
ttaaagcagcagtgtggtggacagtttacgtcaaagatggagggaatggtgacggacttg
acgttggcgaaggaaaatcagagtcactttcaggaatatctcagtaacaactcggcagct
aatcccggaattgatttgactgtcacagttcttacaactggcttttggcctagttataaa
tcttctgacctgagtctccctgtggaaatggtgaagtgtgtagaggtcttcaaggaattt
tatcagacgaaaacaaaacacaggaaattgacctggatttactcactgggtacatgtaat
atcaatggcaagtttgaatcaaaaactattgaacttattgtgggaacttaccaggctgct
gctctattgctgtttaatgcttcagatagattgagttactcagatatcaaaagtcagtta
aatttggctgacgatgacttgatcagattgcttcaatccctgtcatgtgccaagtataaa
attctgaccaaagagcctagcaatagaactgtttcgtcaacggatcattttgaatttaac
tccaagttcactgacagaatgaggaggattaggatccccttgcctccggtggatgaaagg
aaaaaagtggttgaggatgttgacaaggacagacgttatgcaattgatgcttgtattgtg
cgcataatgaagagccgaaaggtgcttcctcatcagcagctcgtgttggagtgtgttgag
catttgagccgcatgtttaagcctgatttcaaagcaatcaaaaagagaattgaagacctt
atcactcgggactacttggaaagagacaaagagaacccaaacttgttcaagtacttggcc
tga
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