Solanum dulcamara (climbing nightshade): 129899027
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Entry
129899027 CDS
T09577
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
129899027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129899027
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129899027
Membrane trafficking [BR:
sdul04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129899027
Atg1 complex
129899027
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129899027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
129899027
NCBI-ProteinID:
XP_055829750
LinkDB
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Position
8:complement(73191213..73198385)
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AA seq
607 aa
AA seq
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MDFQSNQQGEYGRFEQILAQYLLKSLHIILGLRVPSIRRYGGIEQVKRSDKWFNMVLGDR
PAVLDNLNLLQGNLVEPMIIDIILVQDKDCTSSEHNSGKAFAGSYTETIIERWVVQCENR
RSMVPHMGDSSFKKMYKKTIILLRTLYSMLKLLPAFKAFKKLSSSSQSCYFDINFKVSSF
SEPFSRAEEEMMKQFTFTSVDAQQGRLSLSVTYRENLVDFNLETSASFPPEIITDYVGSP
LTDPMRLFPLTSMDKGVHHTSFPLRRTQSSCSAPVQRPQTWTSGLFRAPSLPQPYVGSPP
LYHAPYELSTSVSDVYGQRIPPNYKFPIHQKATSFDDDQLSPPFSPSPPTNFSGANLVQA
PLRSETGPVSIPHPLIDRTSRHLSPNLSDPNRHYLPPMSPRCTKHDSSSHESPSGIRSSR
KIDLLRVPEPDTGTTNPGQKVSTDARDDSGRFSGLLSSSDSPRVGVSRSSSSRLSFQDDL
DDCDFSCPFIVDDVDISDSRARENLDSRKGSEASSQVSSTTRKSQDAAVGALVHMLRTAP
PLRQDSSCYTSQSLKAEVEGETGTVSQFYVPRKASDALEELKAYTQLKDMLLPKSTTRSG
SEGGNLA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagagtaaccaacagggtgagtatggaagatttgagcaaatacttgctcaa
tatcttctgaaaagcttgcatattattttgggcttgagggttccttctatacgacggtat
ggtgggattgaacaagtgaagaggagtgacaaatggtttaatatggtgttaggagatcgt
cctgcggttcttgataacttgaatctgttgcaaggaaatttggtggaacccatgataata
gatataatacttgttcaagataaagattgtacttcatctgagcacaattcaggtaaagca
tttgcagggtcatatacagaaacaattatagagaggtgggtcgtgcaatgtgagaatcgg
aggtcaatggttcctcacatgggtgattcatctttcaagaaaatgtacaagaagactatt
atactcctccgtaccctttattcaatgttgaagctcctgcctgcattcaaggccttcaag
aaactatcttcttcaagtcagagttgttattttgatattaattttaaggtatcttcattt
agtgaaccattctcaagggcagaggaggagatgatgaagcaatttacttttacttcagtt
gatgcccagcaaggccgtctttccttatctgtgacatatcgtgaaaatctggtggacttc
aacctggagacttctgcatcctttccacctgaaatcattacagattatgttggtagtcca
ctcactgatcctatgaggttattccctttgacctcaatggacaagggtgttcatcatact
tcatttccattgagaaggacacaatcatcttgttcagcacctgttcagcgcccgcagacc
tggacaagtggtctcttcagggcaccttctttacctcagccatatgtaggatctccacct
ttgtaccatgcaccatatgagctttcaacttcagtcagtgatgtatatggacagaggatt
ccacctaactacaaatttccgattcaccagaaagcaactagttttgatgatgaccagctt
tcccctccattttcaccatctccacccacaaatttctcaggtgcaaatcttgtgcaggct
cctttgcgttcagaaactggtcctgtcagtatccctcatccattgatagacagaacttcc
agacacctatctcctaatttgtctgatccaaacaggcattatctcccacctatgtcacct
agatgcacaaagcacgattcttcatcccatgaatccccttctggaatcaggtcatcaagg
aaaatagatttgctaagggttccagagccagatactggaactactaatcctggacaaaag
gtgtccacagatgctagagacgattcagggcggttctcaggtctgctatcttcaagtgat
tcaccacgtgttggagtttctagaagttctagcagcagattatcttttcaggatgacttg
gatgactgtgatttttcctgtccttttatagttgatgatgttgatatttctgattcccga
gccagagagaaccttgattccagaaagggttcagaagcctcgtctcaagtatcttcgaca
actagaaaatctcaagacgctgctgtaggtgcccttgttcacatgctgagaactgctcct
cctttgcgtcaagattctagctgttatacttcacaatctttgaaggcagaagtagaagga
gaaacgggcactgtatctcagttctatgttcctaggaaggcatcagatgcattggaggag
ctcaaagcttacacacaattgaaagatatgttacttcccaagagcacgacccgctcaggc
agtgagggtgggaacttagcttga
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