KEGG   Solanum dulcamara (climbing nightshade): 129899059
Entry
129899059         CDS       T09577                                 
Name
(RefSeq) autophagy-related protein 3
  KO
K08343  ubiquitin-like-conjugating enzyme ATG3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04136  Autophagy - other
sdul04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    129899059
   04136 Autophagy - other
    129899059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129899059
   04121 Ubiquitin system [BR:sdul04121]
    129899059
   03029 Mitochondrial biogenesis [BR:sdul03029]
    129899059
Membrane trafficking [BR:sdul04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    129899059
Ubiquitin system [BR:sdul04121]
 Ubiquitin-conjugating enzymes (E2)
  UBL-conjugating enzymes
   129899059
Mitochondrial biogenesis [BR:sdul03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    129899059
SSDB
Motif
Pfam: Autophagy_act_C
Other DBs
NCBI-GeneID: 129899059
NCBI-ProteinID: XP_055829813
LinkDB
Position
8:complement(50765228..50786777)
AA seq 314 aa
MMVLSQLHGAFKGTVERITSPRTVSAFKEKGVLSVTEFVIAGDNLVSKCPTWSWESGEPS
KRKSYLPADKQFLITRNVPCLRRATSIEEEYEAAGGEVLLDNEDNDGWLATHGKPKENHG
VEDDNLPSIDASEINKKNTIQSIPSYFGGEEEEDIPDMGEYEEADNLIETDPATLQTTYL
VANEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMLRGVEPEVDKYLFLFLKFVASVIPTIE
YDYTMDFDLGSSST
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatggtgttgtcacagcttcacggagcattcaagggtaccgtggagagaatcactagt
cctcgtaccgtttccgctttcaaagaaaaaggcgttctcagcgtcaccgaattcgtcata
gctggtgataatcttgtctccaaatgccctacctggtcttgggaatcaggtgagcctagc
aagaggaagtcttatttaccagccgacaagcaattcttgataactagaaatgttccttgt
ctgagaagagctacatcaatagaggaagaatatgaggctgctggaggtgaagttcttctg
gataatgaggacaatgatggttggttggcaactcatggcaaaccaaaagaaaaccatggt
gttgaggatgataacttgccatctatagatgcatcagaaatcaacaaaaagaacactatc
cagtcgatcccatcatactttggaggagaggaagaggaggacatacctgacatgggagag
tatgaggaagctgacaatcttatagaaacagatcctgctacccttcaaactacatatctt
gtggccaatgagcctgatgatgacaacattctaagaacacgaacctatgatgtcagcatc
acgtatgacaaatattatcaaacacctcgtgtgtggctcactggatatgatgagtcaagg
atgcttttgcaaccagagcttgtacttgaagatgtcagtcaagaccatgcacgcaagacg
gtgaccattgaagaccatccacatcttcctgggaaacatgcttctgtgcatccttgccga
cacggggctgtgatgaagaaaattattgatgttttgatgttgagaggagttgaacccgaa
gttgacaagtatcttttcctgttcttgaagtttgtggcttcggtcattccaacaattgaa
tatgattataccatggactttgatcttggtagcagtagcacctga

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