Solanum dulcamara (climbing nightshade): 129899067
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Entry
129899067 CDS
T09577
Name
(RefSeq) peroxisomal ATPase PEX6 isoform X1
KO
K13339
peroxin-6
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129899067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129899067
Membrane trafficking [BR:
sdul04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
129899067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
RuvB_N
AAA_22
Rad17
NPHP3_N
AAA_33
nSTAND3
AAA_5
AAA_28
RNA_helicase
TsaE
AAA_7
AAA_14
TIP49
AAA_17
DUF815
Parvo_NS1
AAA_25
ATPase
AAA_2
Vps4_C
Mg_chelatase
IstB_IS21
PhoH
Motif
Other DBs
NCBI-GeneID:
129899067
NCBI-ProteinID:
XP_055829831
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Position
8:complement(1367807..1376591)
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AA seq
931 aa
AA seq
DB search
MVEKRKPLILSSTKNLLNSLLNAETQTQISLLPTVQLRAGILQVSKDSSKISNPKFVNFD
DSALVGLTTSQLRRLCITSGSLVLIKNVNTSQQRIGQVVVLDPPSSEKVLSERSSSLSHS
SLTSFLLPLHSYPDFHCVKPGGEVAYLSPILAFNLNLHLSCLRSMIHQGKEALSPIFEAK
SDNIVSEKDNALITLGLEPLDQLPKYATHLRASFVKIPECGTLDSVKKHSSIEAEDRQEL
IDMELNKYFGVDRFLSRGDLFSVCINWNCKSALCIPCRQKKQNDGSDLIYFKVVGMEPSE
EPVLKVNRTRTAFVLGGNVPSAVPPDFLIPRPQGSLPLQVSTVKTLASILIPPLCPSALS
SKFRVVVLLHGLTGCGKRTVVKFIARQLGLHVVEYNCQNIFANSDRKTSAALAEAFSMAR
RYSPTILLLRHFEAFRNLVSNEGSPHDQVGMNLEVASVIKEFTEPIAEDEEIYSEGKSFN
AHDQVKVAQPVNCHPVLLVAAADSPEGLPPTIRRCFSHEISMDPLNEEQRKEMLSQSLQH
VSELLPNTSLEDLVKDLVGQTSGFMPRDLRALVADVGANVVHSHGSQDVKVVHGDLKEGS
HESKPIANDGSHDSAKSLSKEDVMKSLERSKKRNATALGTPKVPNVKWEDVGGLEDVKKS
ILDTVQLPLLHKDLFSSGLRKRSGVLFYGPPGTGKTLLAKAVATECSLNFLSVKGPELIN
MYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDG
LNDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSEASYRERVLKALTRKFKLKE
DISLLSIAKRCPPNFTGADMYALCADAWFHAAKRKALASDSDSTGSDDLDGSIIVEYEDF
LKVLGEISPSLSMAELKKYELLREQFEGSSR
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaaaaaggaagcctttaattctttcttctaccaaaaatctacttaattcactc
ctgaatgcagaaacccaaacccagatttcattattgccaacagtacaattgagagctgga
attcttcaagtgtctaaagattcaagcaagatttcaaaccccaaatttgttaattttgat
gattctgctttggtggggttaactacttctcagcttagaagactttgtattacttctggt
tcattggtacttatcaagaatgtgaatacaagtcaacaaagaattggacaagtggtagtt
ctagatcctcccagttcagagaaagttttatctgagcgcagctcatcactgtcacattct
tccctgacatcatttctcttgccattacatagctatcctgattttcactgtgttaaacca
ggtggagaagttgcttatttatctccaattctggcatttaaccttaatttacatttgtca
tgcttgagatcaatgattcaccaaggaaaagaagctttgtcaccaatatttgaggccaaa
tcagataacatagtgagtgaaaaagataatgctctcattactcttgggcttgaaccttta
gatcagttgccaaaatatgccacacacctgagggcttcttttgtgaagataccagaatgt
gggactcttgattcagttaaaaaacattcatctatagaagctgaagatcgtcaagagttg
attgatatggaattgaataagtactttggagtagatagatttctttctagaggtgatctt
ttcagtgtatgcatcaattggaactgcaaatcggctctgtgcattccttgccgtcagaag
aagcaaaatgatggttcagaccttatatatttcaaggttgtgggcatggaaccttctgaa
gaacctgttctaaaagtcaaccgtactcgaactgcttttgtacttggagggaatgtacct
tctgctgttcctccagattttttgattccacggccacaaggttccctgcccttacaagtg
agcacggtgaagactttagcctccatacttataccaccattatgtccatcagccctttca
tcaaaatttcgggtggttgtgttgttgcatggcttgactggatgtgggaagagaactgtg
gttaaatttattgctcgtcaattaggccttcatgtagtggaatacaattgtcagaacata
tttgcaaattctgatagaaaaacatctgctgcccttgctgaagccttcagcatggctcgc
aggtactctcctactattctacttcttcgccattttgaggccttccgtaacctggtctct
aacgagggttcaccacatgaccaagttggtatgaacttagaagttgcatccgtcataaag
gaatttactgagccgattgctgaagatgaagaaatttactcagaaggaaagtcatttaat
gctcatgatcaagtaaaggttgctcaacccgtaaattgccaccctgtactgttagttgcc
gctgctgatagtcctgaaggccttccaccaactattaggcgttgtttcagtcatgagatt
agcatggatccattgaatgaagaacaaaggaaggaaatgctctcccagtctcttcagcat
gttagtgaactacttccaaatacttctttggaggaccttgtgaaagatttggttggtcag
acatcaggatttatgccaagggatctgcgagctttagttgctgatgttggtgcaaatgta
gtccatagtcacggtagtcaggatgtgaaggttgtgcatggagatctgaaagagggttct
catgagagcaagccgatcgcgaatgatggctcacatgactcagcaaagtcactaagcaaa
gaagatgtaatgaaatcactggaacgatcaaagaaaagaaatgcaacagcattgggtact
ccaaaggttccaaatgtcaaatgggaagatgttggtggccttgaggacgtgaagaaatca
attttggacactgtacagctgcctcttttacataaggacttgttttcgtctggattgcgc
aagcgatctggggttcttttctatggtcctcctggaactggaaaaactttactggcaaaa
gctgttgctactgaatgctccctgaattttctcagtgtgaaagggcccgagttgattaac
atgtacataggagagtcagagaaaaatgttcgggacatttttcagaaggccagatcagct
cgaccatgcgtcatcttcttcgatgagcttgattctcttgctcctgccaggggtgcttct
ggagactccgggggcgtaatggatcgagtggtttctcagatgcttgccgaaattgatggc
ctgaacgactctacccaggacttgtttattattggagctagcaacaggccagatcttatt
gatcctgcccttttgcggccagggcgctttgataagctcctatatgttggtgttaattct
gaagcctcatacagagagagggtccttaaagcacttacgcggaagtttaaattgaaagaa
gatatatctctgctctcaatagcaaaaaggtgtccaccaaacttcacaggggctgacatg
tatgcactgtgcgctgatgcttggtttcatgctgcgaagcgcaaggcattagcttcagat
tcggattcaactggctcagatgatcttgatggctcaattatcgtggaatatgaggatttt
ttaaaggtattgggagagatctctccctcgttgtctatggccgagcttaaaaagtatgag
ttgctccgggaacagtttgaaggatcatcaagatga
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