KEGG   Solanum dulcamara (climbing nightshade): 129899094
Entry
129899094         CDS       T09577                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04144  Endocytosis
sdul04145  Phagosome
sdul04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129899094
   04145 Phagosome
    129899094
   04148 Efferocytosis
    129899094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129899094
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdul04147]
    129899094
   04031 GTP-binding proteins [BR:sdul04031]
    129899094
Membrane trafficking [BR:sdul04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    129899094
 Endosome - Lysosome transport
    129899094
Exosome [BR:sdul04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129899094
  Exosomal proteins of other body fluids (saliva and urine)
   129899094
  Exosomal proteins of colorectal cancer cells
   129899094
  Exosomal proteins of bladder cancer cells
   129899094
GTP-binding proteins [BR:sdul04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    129899094
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 129899094
NCBI-ProteinID: XP_055829877
LinkDB
Position
1:4810478..4818546
AA seq 200 aa
MGCASSAADRNSGRAAGLNPDNGGAIDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES
FAKAQYWVKELQKHGSPDIVMALVGNKADLDEKREVTTQDGIDCAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRPTAA
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggttgcgcatcttcagctgcagataggaattcgggaagggctgctggactcaatcct
gataatggtggagcaattgaccctaaaaatctcaaagtgaagctggtactcttgggtgat
tctggtgttggtaaaagctgtattgttctgcgctttgtacgtggtcaatttgatccgaca
tctaaggtgactgtaggagcttcttttctgtctcaaacaatagccttgcaggactcaact
acagttaaatttgaaatatgggacacagctggtcaagagaggtatgcagcacttgcacca
ttatactaccgaggtgctgctgtcgcagtggttgtgtatgatattactagtcccgagtct
tttgcaaaagcacaatactgggtcaaggaattgcaaaaacatgggagccctgatatagtc
atggctctggttggcaacaaagccgatctcgacgaaaaaagagaagtaacaacacaagat
ggaattgactgtgctgaaaagaacggtatgttctttatagaaacatctgccaagacagct
gataatataaaccagctgtttgaggaaattgccaagagattgccacgaccgactgctgct
tga

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