Solanum dulcamara (climbing nightshade): 129899117
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Entry
129899117 CDS
T09577
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129899117
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129899117
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129899117
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129899117
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129899117
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129899117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Motif
Other DBs
NCBI-GeneID:
129899117
NCBI-ProteinID:
XP_055829915
LinkDB
All DBs
Position
8:74284177..74304465
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AA seq
1098 aa
AA seq
DB search
MASTSKRVAREDEEMLLPRSNLAGEGPQRSDAPIVTGNDGDPQTFRFTCKVENFSRLNVK
KLYSDDFSVGGYKWRIIIFPKGNNVDCLSMYLDAADSAALPYGWSRYARFSLSVVNQIQH
KYSIRKETRHQFNARESDWGFTRFMSLAELYNQYKGYLVDDVCTIEAEVAVGKTVEYLPC
DSKKGTDFVGIKNQGATCYLNSLLQTFYHIPYFRKAVYQIPTTENDMPHVSASMPLALQN
LFYKLQFGDNIVATRELTRSFGWDSQDSFLQHDVEELNRVLCEKLEGKMKGTIVEGTIQQ
LFEGHNMSYIECINVEYKSMKKDSFYDLQLVVKGCSDVYASFDKYVEVDCLDGDNKYEAE
QYGLQDARKGVLFIDFPPVLQLHLKRFEYDSMRDRMIKINDRYEFPLQLDLDRENGKYLS
PEADKTVRNLYTLHSVLVHKGSGQAGHYYALIRPTLSNQWYKFDDERVTKEDAEGLLEEQ
YGGLGERKCMKTSNAYMLVYIRESDKEKVMCTVDQKDIGEHLRARLKREQEDKEQKNKER
SEAQLYTIIKVAGDEDMRRQIGEDIYFDLVDHEKVKSFRIQRQTLFSVFKEEITKEFGIP
VQFQRYWLWARRQNHTYRPNRLLTHLEEAQTVGQLREVSSKVHNPELKLFLEIELGPELM
PLSPPEKAKDDILLFFKLYDPEKEDIRYVGRLFAKGVSNPTEILSKLNEMAGYAPDQEIE
LYEEIKFEPNVMCENIDKNSTFRSSQLEDGDIVCFQKSLTAESRQKFRYPDVPSFLEYVH
NRQVVHFRSLDKPKERGFWLELSLINTYDEIVGRIAQQLELDDPSKIRLTSHNCYSQQPK
PQPINYRGFDNLVDMLVHYNKTSDILYYEVLDIPLPELQSLKPLKVVFHHATKDEVVIHT
FRLPKQSTVDDVIKNLKTKVELSHSNAELRLLEVFYHKIYKILPTTEKIENINDQYWTLR
AEEIPEEEKNLGPHDCLAHVCHFKKEAAQNQMKIQNFGEPFLLIIHENETLAELKLRIQK
KLQVPDEEFAKWKFAFLSLDRLEYLEDMDILSSRLQRRDVSGVYEQYLGLEHSDGAPKRT
HAAHQNRHSHEKSVKIYN
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacatctaaaagagtagctcgagaagatgaggagatgttgcttccacgttct
aatttggccggtgaaggtcctcagcgcagcgatgcaccaatagtaacaggaaatgatggg
gatccccaaacattcaggtttacttgtaaggtagagaacttctctaggttgaatgtaaag
aagctgtactctgacgatttttctgtcggaggctataaatggcggattataattttcccc
aagggcaacaatgttgattgcttgtctatgtatctggatgctgctgattcagctgcttta
ccttatgggtggagtagatatgcccggttcagtttgtcagtagttaatcaaattcagcac
aagtactcaatcagaaaagagacacgacaccaattcaatgctagggaaagtgattggggt
ttcacacgctttatgtcacttgctgagctatacaatcaatataagggttatcttgttgat
gatgtgtgcaccattgaagctgaggttgctgtgggaaaaactgttgagtatttgccgtgc
gactctaaaaaaggaactgattttgttggaatcaagaatcaaggagctacatgttatttg
aactctctgctccaaactttctaccatattccttatttcaggaaggctgtataccaaatc
cctacaactgagaatgatatgccgcatgtgtctgcgagcatgcccctggccttgcaaaat
ttattctacaagctccaattcggtgacaacattgtagcaacaagggagttgacaaggtca
tttggatgggactctcaagattctttcttgcagcatgatgtggaagaactcaatagagtt
ctatgtgaaaagcttgagggaaagatgaagggaaccattgtggagggtaccatacaacag
ttatttgaagggcacaatatgagctacattgagtgtatcaatgtggaatacaaatctatg
aaaaaggattcattttatgatcttcagcttgttgtcaaaggttgttctgatgtttatgct
tcttttgataaatatgttgaagttgattgtcttgacggtgataacaaatatgaagcagag
caatatggtttgcaggatgcaaggaagggtgtgttgtttattgatttccccccggtcctg
cagcttcatttaaagcgctttgaatatgattctatgcgagacagaatgataaagataaat
gaccgatatgagttccctttgcaacttgatctggacagagagaatggtaaatacttgtct
cccgaggctgataaaactgtcagaaacctttacacacttcacagtgtattagtccataag
ggtagtgggcaagctggacactattatgctttaatacggccaactctttcaaaccaatgg
tataaatttgatgatgaaagagtgactaaggaagatgcagaagggttattagaagagcaa
tatggcggtctaggggagcgtaaatgtatgaagacctcaaatgcttacatgctggtctat
atacgagaaagtgataaagagaaagtaatgtgtactgttgatcagaaggacataggtgaa
cacctgagggcaaggttgaaaagagaacaagaggataaagagcagaagaataaggaaaga
tcagaggcacaactttacacaattataaaggttgctggtgatgaagatatgcgacggcag
attggagaggatatatattttgatttggtggatcatgagaaagttaagagcttccgcatt
caaagacagacactttttagtgttttcaaggaggagatcacaaaagagtttggtatacca
gtgcaatttcaacgttattggctctgggcaaggcgtcagaatcacacgtatcgtcctaat
cggctattgacacatcttgaagaagctcaaactgttggacaattgagggaagtatccagt
aaggttcacaatccagagctaaaattgtttctggaaatagaattgggaccggaactaatg
cccctctctccaccggaaaaggccaaagatgatattctgctttttttcaagctttacgat
cctgagaaagaagatatacggtatgttggaagactctttgcgaagggagtcagtaatccc
actgaaatcttgagcaaactaaatgaaatggctggctatgccccagatcaagagattgag
ctttatgaggaaataaagttcgaaccaaatgtcatgtgtgaaaacattgacaagaactcc
acttttcgatcaagccagcttgaggatggtgacatagtatgcttccaaaaatctctaacg
gctgaaagtcgacaaaaattccgttatcctgatgttccttccttcctggagtatgttcac
aatcgccaggtcgttcacttccgatctttagataaacccaaggagcggggtttctggtta
gagctgtctttgatcaatacatatgatgaaattgtgggaagaatagctcaacaactcgag
ttggatgatccctccaaaattaggctcacatcccacaactgctactctcagcaacctaaa
cctcaaccaataaattaccgaggtttcgacaaccttgtagatatgctggtccactacaat
aagacttctgatatattgtactatgaagtactggacatccctttgccagaattgcaaagt
ttgaaacccttaaaagtagtttttcatcatgctaccaaagatgaagtggtcattcacacg
ttcagactaccaaaacaaagtactgtggatgatgtaattaaaaatttaaagacaaaggtt
gagttgtcgcattcaaatgcagagctaagattactagaggtattttaccataagatttac
aagatattgccaactacagagaagatagaaaacataaatgaccagtactggacactacgg
gccgaagagatacctgaagaagagaaaaatcttggcccacatgattgtttggctcatgta
tgccactttaagaaggaggcagcacaaaatcaaatgaaaattcaaaattttggggaacct
ttcctcttgattatccacgagaatgagacattagctgaacttaagttgcgtatacagaag
aaattgcaggtcccagatgaagagtttgctaagtggaaatttgcattcctctctcttgat
cgtcttgagtaccttgaggacatggacatcttgtcgagtcgtttacagcgaagggatgtc
tctggtgtttacgagcagtatcttggattggagcattctgacggtgctcctaaaaggact
catgcagcacatcagaatcgccactcgcatgagaaatctgtgaaaatatacaactag
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