Solanum dulcamara (climbing nightshade): 129899138
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Entry
129899138 CDS
T09577
Name
(RefSeq) elongation factor TuB, chloroplastic-like
KO
K02358
elongation factor Tu
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129899138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sdul03012
]
129899138
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129899138
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129899138
Translation factors [BR:
sdul03012
]
Eukaryotic type
Elongation factors
129899138
Prokaryotic type
129899138
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
129899138
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129899138
Exosomal proteins of breast cancer cells
129899138
Exosomal proteins of colorectal cancer cells
129899138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
GTP-eEF1A_C
cobW
DAP_epimerase
MTRES1_C
Motif
Other DBs
NCBI-GeneID:
129899138
NCBI-ProteinID:
XP_055829935
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All DBs
Position
8:complement(72304816..72306619)
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AA seq
482 aa
AA seq
DB search
MASISAASATAAAAASTKLNTSGGVLPSNSTKSSKLILSSSFTPTPSTLFLHSAATTTTN
TTSSTRHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKY
DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS
GADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDD
IPIHSGSALLALEALMANPSIKRGDDQWVDKIYALMDSVDEYIPIPQRQTELPFLMAIED
VFSITGRGTVATGRVERGTVKVGEIVDIVGLKDTRNTTVTGVEMFQKILDEAMAGDNVGL
LLRGIQKIDIQRGMVLAKPGTITPHTKFEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTD
VTGKVTAIMTDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKI
LE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatttcagcagcttctgccactgctgctgctgcagcttctacaaagcttaat
accagtggtggtgttcttccttcaaattccacaaaatcctctaagcttatcctttcatct
tcttttacaccaaccccatcaacccttttcctccattcagcagccaccactactactaat
actacttcttccacccgccaccgccggtttactgtccgagctgctcgtggtaaattcgaa
cggaagaaaccccatgtcaatattggtacaattggccatgttgaccatgggaaaaccaca
cttacagctgctttgaccatggcgcttgcttctctgggtaactcagccccgaaaaagtat
gatgaaattgatgctgcccctgaagaaagggctcgtgggattactattaatactgccaca
gtggaatatgaaactgagaataggcattacgcccatgtggattgcccgggtcacgctgat
tatgtcaagaacatgattactggtgctgcccagatggatggagctatacttgttgtttca
ggggctgatggtccaatgccgcagactaaggagcatattttgcttgctaagcaagtgggt
gtccctaatatggttgttttcttgaacaaacaagaccaagttgatgatgaggagttgctt
cagcttgttgagttggaggtaagagagttattgtcaagttatgagtttcctggtgatgat
attcctattcattctggttctgcccttttggctttggaggctttgatggctaatcctagt
attaaaaggggtgatgatcaatgggttgataagatttatgcattaatggactctgttgat
gaatatattcctatcccacaaagacaaactgaattgcctttcttgatggctattgaagat
gtgttttctattaccggtagaggtacagtggctacagggagagtggagagagggactgtt
aaggttggggaaattgttgatatagttggattgaaggacactaggaacactacagtgaca
ggggttgagatgtttcagaagatattggatgaagcaatggcaggagataatgtggggttg
ttgttgagaggtattcagaagatcgatattcaaagaggaatggtgttggcaaaacctgga
acaattactccacacaccaagtttgaagctttggtgtatgtgttgaagaaggaagaaggt
ggcaggcattcccctttctttgcgggttataggccacagttttacatgaggacaactgat
gtgactggaaaggttactgctattatgactgacaaaggagaggaatctaagatggtcatg
cctggtgatcgcgtaaacatggtggttgagctcattatgccggttgcttgtgagcaaggc
atgaggttcgctattagggaaggaggaaagactgttggagctggtgttattcagaaaatc
ttagaatga
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