Solanum dulcamara (climbing nightshade): 129899167
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Entry
129899167 CDS
T09577
Name
(RefSeq) oligouridylate-binding protein 1B-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129899167
03041 Spliceosome [BR:
sdul03041
]
129899167
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129899167
Spliceosome [BR:
sdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129899167
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
129899167
NCBI-ProteinID:
XP_055829984
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Position
8:complement(68240774..68246268)
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AA seq
417 aa
AA seq
DB search
MQNQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVFVGN
IHPQVTEPLLQEVFSSTGLVEGCKLIRKEKSSYGFIHYYDRRSAALAIVTLNGRHLFGQP
IKVNWAFASGQREDTSSHFNIFVGDLSPEVTDAMLFACFSVFPGCSDARVMWDQKTGRSR
GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGANSNDDKQSSDAKSVVELTNGS
SEDGKEAANSDAPENNPQYTTVYVGNIAPEVTQLDLHRYFHALGAGVIEEIRIQRDKGFG
FVRYNTHAEAALAIQMGNTHSVLGGRQIKCSWGNKPTPPGATSNPLPPPAPTPLGISATD
LLAYERQLAMSKMGGVPGLMGQYPLKQASMGMASGASQAIYDGGFQNVAAQQLMYYQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatcagaggctgaagcaacaacaacagcaagctttgatgcaacaagcgcttctt
caacaacagtctctgtatcaccctggcctcttagctcctccgcagattgagccaatacct
agtggaaatctgcctcctgggtttgatccaagcacctgccgcagtgtgtttgttgggaat
attcacccgcaagtgactgaacctcttcttcaggaagttttctctagtactggtcttgtg
gaaggatgtaagctgataaggaaggaaaagtcatcttatggtttcatccattactatgat
cgtagatcagctgcacttgctatagtcactcttaatggaaggcatctgtttgggcagcct
attaaagttaattgggcttttgccagtggacagagggaggacacttcaagtcactttaat
atatttgttggtgatctaagcccggaagttactgatgcaatgctgtttgcttgcttctcg
gttttccctggttgctctgatgcaagggtaatgtgggatcaaaagactgggcgttctagg
ggttttggttttgtttctttccgtaaccaacaggatgctcaaagtgccatcaacgattta
acaggcaaatggcttggtagtaggcagatacgttgcaactgggctaccaaaggtgctaac
tcaaatgacgacaaacagagttctgatgccaaaagtgttgtggaattaacaaatggttca
tcagaagatggtaaagaggcagcgaatagtgatgctccagaaaataatccacaatacacc
actgtttatgtgggaaatattgctccagaggtaacacagcttgatctccatcgctacttt
catgcccttggtgcaggagtgattgaggaaattcgaattcagcgtgataaagggtttggt
tttgtaagatacaatactcatgctgaggcagcgttagcaattcaaatgggaaatacccac
tcagttctgggtggaaggcagattaagtgttcgtggggtaacaagccaactccacctgga
gcaacctcgaacccacttcctccaccagctcccacaccattaggtatttcagccactgac
cttttggcatatgagagacagctagctatgagcaagatgggtggtgtcccaggcctcatg
ggtcaatatcctttgaagcaagcatcaatggggatggcctctggagcaagccaagctata
tatgatggtggtttccagaatgttgctgcacaacagctcatgtattatcagtga
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