Solanum dulcamara (climbing nightshade): 129899214
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Entry
129899214 CDS
T09577
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129899214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129899214
Spliceosome [BR:
sdul03041
]
Complex C
Other components
Step II factors
129899214
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
129899214
NCBI-ProteinID:
XP_055830064
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Position
8:complement(78577602..78583229)
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AA seq
536 aa
AA seq
DB search
MATASVAFKSREDHRKQLELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIYQADKYRKGACENCGAMTHNSKSCMDRPRKLGAKW
TGKHIAPDEKIEQFELDYDGKRDRWNGYDAASYAHIIERYEARDEARKKYLKDQQLKKLE
EKNNKDDEERGDSEDEDFEDALKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFKQLNI
HAWEAFDKGHDVHMQAAPSQAELLYKNYKVNKEKLKSQTKEDIMEKYGNAASEEILPREL
LLGQSEREVEYDCAGRIVKGQEMSIPRSKYEEDVFINNHTTVWGSWWKDHQWGYKCCKQT
IRNSYCTGAAGIEAAEASADLMKANIARKESAEDTHAPVEEKRVATWGTEVPDDLVLDQQ
KLAEALKKEDEKRREERDERKRKYNVKYNDEVTPEEMEAYRMKKVLHDDPMRDFLH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcttcagtggcgtttaagtccagggaggaccacaggaaacagttggaattg
gaagaggcgcgaaaggctggtcttgcaccagcagagttggatgaggatggaaaagaaatt
aatcctcacattcctcagtatatgtcttcagctccttggtatctcaatgcagagagacca
agtttgaaacatcaaaggaaatggaaatctgatccaaattacacaaaatcatggtatgac
agaggtgcaaaaatatatcaggctgacaagtatcggaagggtgcatgtgaaaactgtgga
gcaatgacgcacaattctaagtcatgcatggacaggccacgcaaattaggagcaaaatgg
accggaaaacatattgctcctgatgagaagatagaacagtttgagctggattatgatggt
aaaagggatcgttggaatggttatgatgctgcttcttatgctcatatcattgaacgatat
gaagcaagggatgaagcaagaaagaaataccttaaagatcaacaactaaaaaagttggag
gagaaaaataacaaagatgatgaagaaagaggtgacagcgaagatgaagattttgaagat
gctttgaaggtagatgaagcgaaggttgacgaaagcaagcagatggattttgcaaaagtt
gagaagcgtgtacgaaccactggaggtggaagcacaggaactgttaggaatctacgtatc
cgggaagatacagcaaaatatcttcttaatcttgatgtcaattctgcacactatgatccc
aagacccggtccatgcgtgaagatcctcttccagatatggatccaaatgaaaaattctat
gctggtgataaccaaaatagagttagtggtcaagcactggagttcaaacagctgaatatt
catgcttgggaagcttttgataagggtcatgatgttcatatgcaagcagctccatcccaa
gcagaactgctttacaaaaattacaaggttaacaaggagaaactgaagtcacaaacaaag
gaggatatcatggagaagtatggtaatgctgccagtgaagaaatactcccgagagaatta
ctgttgggtcagagtgagagagaagttgaatatgattgtgctggtaggattgtgaagggc
caggagatgtctatccctaggagcaaatatgaagaggatgttttcatcaataaccacact
accgtttggggttcatggtggaaggatcaccagtggggttacaaatgctgcaaacagaca
atcaggaacagctattgtacaggtgctgctggaattgaagcagctgaagcttctgctgat
cttatgaaggcgaatattgctcgcaaagagtctgctgaagatacacatgcaccggttgag
gagaagagggtcgctacttggggaactgaagttcctgatgatttagttctggaccagcaa
aagctggctgaagctcttaaaaaggaggatgaaaagagaagagaagagagggatgaaagg
aaaaggaaatacaacgtgaagtacaatgatgaggttacaccggaagaaatggaggcctac
agaatgaaaaaggtcctccatgacgatccaatgagggacttcttgcactga
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