Solanum dulcamara (climbing nightshade): 129899229
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Entry
129899229 CDS
T09577
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129899229
Spliceosome [BR:
sdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129899229
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GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
MCM3AP_GANP
Motif
Other DBs
NCBI-GeneID:
129899229
NCBI-ProteinID:
XP_055830081
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Position
8:57310086..57316716
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AA seq
509 aa
AA seq
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MCFDSLKVQDSQRYQDLLLALLLLLRLLTCSFVEQNPVLFCLRLVTCWAVSVLILWFGMS
SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF
AELNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGNDA
RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLIP
ELGPCSLKITYSAHTDLSVKFQSHRSRDYTNPLLPVASSAIDANGQISVGLDGKKLEPES
NVLLASIENMQYAVTLDVLHTVFSAFGAVLKIAMFDKNGEVQALIQYPDVQTAVVAKEAL
EGHSIYEGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNVPMMNSQPPMINSQPLVMGQQ
PPSVGGPGVHPYNGPTQYAPAPHGLGAPQHSAGWNSPVGAAPPQMPMQMHNHHYSMPASG
PPQMGPGMMPMHGQNGLPHCGGMPPYRPQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttgattccttgaaggtacaagattcccagcgctatcaagatctattgctcgct
cttcttctgctattaaggcttcttacttgttctttcgtcgaacaaaatcctgtgcttttc
tgtcttcgccttgttacttgctgggctgtatctgtgttgattttgtggttcggaatgtca
tctgtatctagccagcctcagttcagatacacacagcctccctctaaggttcttcattta
agaaatttaccatgggagtgcacagaagaggaactgattgaattggggaagccatttggt
aaagttgtcaataccaagtgtaatgttggagcaaatagaaatcaagcatttatagagttt
gcagaattgaatcaagctattgcaatgatatcgtactacgcatcttcctcggaaccagct
caggtacgagggaaaaccgtctacctacagtattccaacaggcaagagatagtaaacaac
aaaactactgctgatgtagctggaaatgtattgttggtaactattgagggaaatgacgca
cgccttgtcagtattgatgttttacacttggtgttctcagcttttggatttgtccataag
attactacatttgagaaaactgctggattccaggctctagtgcaattttctgatgcagaa
actgccacttctgcaaaggatgcccttgatggaagaagcattcccaggtatttgattcca
gaactgggaccttgctccctcaaaataacatattctgcacatactgatctgagtgtgaag
tttcagagtcatcgtagcagggactacaccaatcctctccttcctgttgcttcctcagcc
attgatgcaaatggtcagatcagtgtgggtttagatgggaagaagctggagcctgagagt
aatgttcttctagcttccattgagaacatgcaatatgctgtaaccttggatgtcctacac
acggtattttcagctttcggcgctgtgctaaagattgcaatgtttgataagaatggtgag
gttcaggctctgatacaatatcctgatgtgcagacagcagttgttgcaaaggaagcttta
gaaggacattccatctatgaaggaggattttgtaagcttcatatctcctactctcgccac
actgatctcagtataaaggtgaataatgatcgcagcagagattatacaatcccgaatgtc
cctatgatgaactctcaacctcctatgataaactctcaacccttggtcatggggcagcaa
ccaccttcagtaggaggtccaggtgttcatccatacaatgggcctacacaatatgcccca
gctcctcatggacttggtgcacctcagcattcagcaggctggaactcacctgttggtgcc
gcgcctccacaaatgccgatgcagatgcacaatcaccattactctatgccagcaagtgga
cctcctcaaatgggtcctgggatgatgccaatgcatggacagaacggcctaccacattgc
ggtggaatgcctccttatcgtccacaatag
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