KEGG   Solanum dulcamara (climbing nightshade): 129899268
Entry
129899268         CDS       T09577                                 
Name
(RefSeq) protein decapping 5-like isoform X1
  KO
K18749  protein LSM14
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129899268
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129899268
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 129899268
NCBI-ProteinID: XP_055830140
LinkDB
Position
8:complement(70698326..70709254)
AA seq 673 aa
MATAASKAADSYIGSLICLITKSDIRYEGFLFHLDAPESTIGLRNVKSYGSEGRKKDGPQ
ISPSDKIYEYIFFRGSDIKDLQVISSPSPQSTSVVPDDPAIIQTHFPNPTPPTIGMTSPG
AAQVADFSTSAPSMLPVAPFLLNLPPNPLLPSPRLWGSSLPPPPVNISGPTVPNYWPGLV
GSSGGVSHFQQQRFPPPPQSLVASLPIQQQAQHQNVNALARGSSLAAQHHPLLLPISTTS
SNLLPAVPSPSGQSNPGQPAKPAFNLSSIPMPNDAFRALSTVAVDSCPRTVSSLEAELNA
NAILAPVRKEPRSVISTSDSFPTFAQTVSSIVDTKGASLSNLSRPSLLTPEVQSGVKDSS
SSQLMRNPNFDVHTVQASVSEPLPSGSTEETPESLSKLPTKTLRGSTSSHHNISHFARGR
DGAHQDTSSTYHNRRGHTHRGNAPNGGAVYAQQSYRKHASGRGNGLIGAALHSRQSNMGM
GRGKVPNGVPQHKPRNTGSQFRDGVPQHNLRNTGSQFRGRGAKNPHVAKRFFEDFDFEAM
NEKFNKKEVWDFLGRSSKAESDEGIGVEKEMDESDAEDVTGDGSAKHDKPVYCKEDFFDS
LSCHTLDRESGKVKFSEQRKKDAETFGETQKNQRGRGQGARMSGASQQSYRGRGYDNARG
GRGQGRTVWGRVT
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggcaacggcggcctctaaggcagccgactcctacattgggagtctcatttgcttgatt
acaaagtctgatattcgatatgaaggatttctattccatctagatgctcctgaatccacc
atcggtcttcgtaacgtgaaatcttatgggtcagaaggacgaaagaaggatggacctcag
atatctcccagcgacaaaatttacgagtacattttcttccgtggcagtgacataaaggat
ctgcaggttatatcttcaccatcccctcaaagtacatcagttgttcctgatgatcctgcc
ataatacagacacattttcctaatccaacaccaccaaccattggcatgacatctcctggt
gctgcacaagtagcagattttagtaccagtgcaccgtccatgctccctgttgcacctttc
ttattgaatctgccccccaatccattgctaccaagtcctagactttggggctcatcactt
cctcctccacctgtaaatattagtgggcctactgtgcctaattattggccaggattagtt
gggtcctcagggggagtttctcattttcaacagcaacgttttcctccgccaccacagagt
ttggttgcatcccttcccattcagcagcaagcgcaacaccaaaatgtgaatgcattagcc
agaggatctagtttggctgcacaacatcacccattgctgctgcctattagtactacttcc
tcaaatttacttcccgccgtgccgtctccatctgggcaatccaatcctgggcagcctgct
aaaccggcttttaatttgtcatctattccaatgccaaatgatgcattccgtgctctttca
actgtagcagtggattcttgcccaagaacagtatcttctctggaagcagaacttaatgcc
aatgctattctggctccagtgcggaaagaaccaaggtccgtcattagcacttcagattct
ttcccaacatttgctcaaactgtgtcatctattgtagacacaaaaggtgcatctctcagc
aatctgtcaagaccatccctcttgacaccagaggtacagtcaggagtgaaggattcctca
tcatctcagttaatgcgaaatccaaactttgatgtacacactgttcaagcatcagtatca
gaacctctgccatcagggagtactgaagaaaccccggagtcattatcaaaattgccaact
aaaacattacgtggatctacatcatctcatcacaatataagtcactttgctcggggaaga
gatggggcacatcaagacacatcatccacttatcacaataggagaggccacacacacaga
ggaaatgcgccaaatggaggtgctgtttatgcacaacaaagttacaggaaacatgcatca
ggaagaggaaatgggcttattggagctgctctacattctcgtcagagtaatatgggcatg
ggcagaggaaaagtgccaaatggtgttcctcaacacaaacctcgcaatacaggaagtcaa
tttcgggatggtgttcctcaacacaatcttcgcaacacaggaagtcaatttcggggacgt
ggagctaagaatccccatgtggctaaaagattcttcgaggattttgattttgaggcgatg
aatgaaaaatttaataagaaagaggtatgggattttctaggcagaagtagcaaagctgaa
tcagatgaaggaatcggggttgagaaagagatggatgaaagtgatgcagaggatgtaact
ggggatggaagtgcaaaacatgacaagcctgtttattgtaaggaggacttctttgattcc
ctttcttgtcacacacttgatcgtgaatctgggaaagtaaagttctctgaacaaaggaaa
aaagacgctgagacatttggtgagactcagaaaaatcaacggggtcgtggtcagggagct
cgcatgtcaggtgcatctcaacaatcataccgtggaagaggatatgacaatgcacgtggt
ggccgtggccaaggaagaactgtttggggtcgtgtcacttga

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