Solanum dulcamara (climbing nightshade): 129899311
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Entry
129899311 CDS
T09577
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129899311
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
129899311
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
129899311
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Motif
Pfam:
PRORP
PPR_long
PPR_2
PPR_3
TPR_24
RNase_Zc3h12a
Motif
Other DBs
NCBI-GeneID:
129899311
NCBI-ProteinID:
XP_055830205
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Position
8:66806902..66816608
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AA seq
563 aa
AA seq
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MLVRRMGYFSSSLSKKTSPFFSLLPKTPFPFHLPPIQFFKPIHTKFPQTHLFSMNQKTHL
TTSAAFLQEPTKTLSSRSAKKARRDAPESVLRHQLDQCSKRGDLQEAIRLYEEAKLNNVS
LNVHHYNVLLYLCSSGSGTEGYGIEKGFHIFKQMGVNGVAPNEATFTSAARLAVAKQDPE
MAFDLVKKMKSFGVPPKLRSYGPSLFGFCDKGMADKAYEVDVHMGESGVVAEEAELSALL
KVSSLSKKADKVYEMMHRLRASVRQVGEETAGVIEDWFNSEFAAEVGLQNWDVRRVKEGV
VKGGGGWHGQGWLGKGNWTVVRSEMDSSGVCRSCGEKLVCIDIDPKETENFANSLAKLAC
EREVKANFVQFQDWLQKHGPFDAVVDGANVGLITQRNFNFSQLRSVVNKLRQMSESKKLP
LVILHKSRTTGGPAQHPNNKKLLESWKKAGALYATPHGSNDDWYWLYAAVSSKGLLLTND
EMRDHLFQLLGTSFFPRWKEKHQIRMTASRDDGLKLHMPPPYSIVTQESEQGCWHVPTLT
GDDLELPRQWVCATRRKALHSLF
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttcgtcgcatgggttatttctcatcttctttatctaaaaaaacctcacctttc
ttctctctcctcccaaaaaccccgtttccatttcatcttccccctatccaattcttcaaa
ccaattcataccaaattcccacaaacccatcttttttccatgaaccaaaaaacccatctc
accacttccgctgctttcctccaagaacccacaaaaaccttgtccagcaggtccgccaag
aaagcccgccgtgacgcccctgagagtgttctgcgtcatcagctagatcagtgttctaaa
cgcggtgacttacaggaagcaattcgactctatgaagaagctaagttaaacaacgtttcc
ctcaatgttcatcattataatgtgttgctttatctttgttcttctggttcgggtactgag
ggatatgggattgagaaaggatttcatattttcaaacagatgggtgtaaatggtgttgct
cctaatgaggcaacgtttactagtgctgctagattggcagttgctaagcaagacccagaa
atggcttttgatttagtgaagaaaatgaagagttttggtgttcctcctaagttaagatca
tatgggccatcattatttgggttttgtgacaagggaatggctgataaggcttatgaagtt
gatgtacatatgggggaatcaggggttgtggctgaggaagcagagctttctgcactgttg
aaagttagttctttgtctaaaaaggctgataaagtatatgaaatgatgcatagattaagg
gcaagtgtaaggcaggtgggtgaagagactgctggtgtaatagaggattggtttaattct
gaatttgctgcagaggttgggctgcagaattgggatgttcggagagttaaggaaggtgtt
gtgaaaggagggggtggttggcatggacaagggtggttgggaaaggggaattggactgtg
gtgagatcggagatggatagttccggagtttgtcgttcatgtggggaaaagcttgtgtgc
attgatattgatcctaaggagacagagaactttgctaattccttggctaaattggcttgt
gaaagagaagtcaaggctaattttgtgcaatttcaggactggcttcagaagcatggtcca
tttgatgctgtggtggatggtgcaaatgtcggacttatcactcaacgaaattttaatttc
tctcagctcagatctgttgtcaataaattaaggcagatgagtgaatcaaagaaacttcca
ttggttattttgcacaaaagtcgtacaactggtggtcctgctcaacatcctaataacaag
aagcttttagaaagttggaagaaagcaggtgcactttatgccactccacatggttcaaat
gatgattggtactggttatatgctgctgtcagttccaaaggcttgcttttgacaaatgat
gagatgagagaccatttgttccaactattaggcactagtttttttcccagatggaaggaa
aaacatcagatccggatgacagcttcaagagatgacggacttaagctccatatgccgcca
ccttattcaattgttactcaggaatcagagcagggttgttggcatgtgccaactcttact
ggagatgaccttgagctaccaagacagtgggtatgtgctaccaggagaaaagcactgcac
tctctcttttga
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