Solanum dulcamara (climbing nightshade): 129899336
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Entry
129899336 CDS
T09577
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129899336
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129899336
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129899336
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
129899336
NCBI-ProteinID:
XP_055830249
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Position
8:57321687..57326942
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AA seq
708 aa
AA seq
DB search
MNHRQEEFSRFQDWKSEKTSEGNFHAKDGVHRSKVVIAANELYKGLEPGKWRAKSIIQAV
KSSLSGFVEENLGSNKNILDPQGPFLQKWNKIFVLSCVIAISLDPLFLYIPLIDNDNKCL
GLNRTLEVTASVLRSFTDIFYFLHIALQFRTGFIAPSSRVFGRGVLVEDAWEIAKRYLST
YFLIDILAVLPLPQVVILIIIPKLRGARSLNTKNLLKSVVFFQYIPRVLRVYPLYTEVTR
TSGIFTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWKQACGNSSACRHASLYC
DDDHTRFKTLLNTSCPIETPNTTLFDFGMFLDALQSDVVGSMNFPQKFFYCFWWGLQNLS
SLGQNLQTSTYVWEICFAVFISISGLVLFAFLIGNMQTCLQSSTMRLEEMRVKRRDAEQW
MSHRLLPENLKERIRRYEQYKWQETRGVEEENLIHNLPKDLRRDIKSHLCLALLMRVPMF
EKMDEQLLDALCDRLKPVLYTEDSFIVREGDPVGAMLFVMRGKLLSVTTNGGRTGFFNSE
YLKAGDFCGEELLTWALDPHSSTNLPISTRTAQALSEVEAFALVADDLKFVASQFRRLHS
KQLRHTFRFYSGHWRTWAACFIQAAWRNYCRKKVEESLRVEESRLQDALAKEGSSSPSFG
ATIYASRFAANALRALRRNTANKARVPDRISPILLQKPTEPDFTAEDK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccgacaagaggagttttccagatttcaggattggaaatcagagaaaacctct
gaaggaaattttcatgctaaggatggagtgcaccgaagtaaagttgtaatagctgctaac
gaattatataaaggcttggaacctggtaaatggagggccaaaagcataatacaagccgta
aaatctagtttaagtggttttgtggaagaaaacttgggatccaacaagaacatacttgat
cctcaaggaccttttcttcaaaagtggaacaaaatatttgtattatcctgtgtaattgcg
atctccttggatcctttgttcctttacattccattgattgataatgacaacaaatgtctg
gggttaaacagaacattggaggttacagctagtgttttgcgttcttttactgatatattt
tactttcttcatattgcccttcaatttcgaactggtttcattgctccttcttcacgtgta
tttggaagaggtgttttagttgaagatgcttgggagattgcaaagagatacttgtccacg
tacttcttgatcgatattcttgcagttcttccactaccacaggttgtaattttaattata
atccctaagttgcggggtgcaagatctttgaataccaagaatttgctgaagtctgttgtc
tttttccaatatattccaagggtccttcgagtttatcctttatatacggaagtcacaaga
acatctggcatattcactgaaacagcatgggctggagctgctttcaatctcttcctctat
atgcttgcgagccatgtacttggagccttttggtatctgttttctatagaacgtgaaact
acttgctggaaacaagcttgtggaaattcctctgcctgtcgtcatgcctcattatattgt
gatgatgatcatacgagatttaaaacgttgctgaatacttcctgccctatagagacacca
aacacaacgctctttgattttgggatgttccttgacgctctccaatcagatgttgtggga
tcaatgaattttccacagaagttcttttattgtttctggtggggtttacaaaatttaagt
tcccttggtcaaaacctccaaacaagtacctacgtatgggaaatttgctttgcagttttc
atttccatctccggcctggtgctatttgcctttctcattggaaatatgcagacatgtctg
cagtcctcaacaatgagactagaggagatgagggtgaaaaggcgagatgcagaacagtgg
atgtcacatcggttactccctgagaacctcaaagagagaattagacgctatgagcaatac
aagtggcaggaaacaaggggtgttgaggaagagaatctgattcacaaccttcccaaagac
ctcagaagagatataaagagtcatctttgtttagctttactcatgagagtgccaatgttt
gaaaaaatggatgaacaactcttggatgcattatgtgaccgactcaagccagtgctctac
accgaggacagcttcattgttcgcgaaggtgatccagttggtgcgatgctgtttgtaatg
agggggaaactactatctgtaaccactaatggagggaggacaggtttttttaactccgag
tatctaaaagctggtgatttctgtggagaggagttacttacttgggctcttgaccctcat
tcatcaactaacttacctatctcaacccgaactgctcaagcactctcagaagttgaagca
tttgctttagtggctgatgatttaaagtttgtggcctctcagtttcgaagacttcacagt
aagcagctccgccatactttcaggttttactcaggtcattggagaacttgggcagcttgc
ttcatacaagcagcatggcgcaattattgcaggaagaaggtagaggagtctcttcgtgta
gaagaaagcaggttgcaagatgcattagcgaaggaaggttccagttcaccaagttttggt
gctaccatctatgcatcaagatttgctgctaatgcacttcgcgctctgcggcgcaatact
gcaaacaaagcaagggtgccagacaggatatcacccattctgcttcagaaaccaacagag
ccagattttactgctgaagataaataa
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